Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
PWMenrich
•
reset
0
votes
0
replies
770
views
How to interpret difference statistic from the output of the motifDiffEnrichment() function in the PWMEnrich package?
PWMEnrich
6.0 years ago
intregen
• 0
0
votes
0
replies
898
views
makeBackground error message "Sequence only contain N's"
pwmenrich
6.7 years ago
gdeniz
• 0
0
votes
1
reply
981
views
subsetting PWMLognBackground object in the PWMEnrich package
PWMEnrich
6.9 years ago
amanda.joy.price
▴ 10
0
votes
0
replies
815
views
PWMEnruch: Error in getPromoters(organism)
r
pwmenrich
7.0 years ago
prp291
• 0
0
votes
1
reply
2.2k
views
Convert HOMER motif matrix to pfm?
homer
pwmenrich
updated 8.4 years ago by
Ou, Jianhong
★ 1.3k • written 8.4 years ago by
sarah.blackstone7734
• 0
0
votes
0
replies
1.1k
views
question about motif enrichment analysis using PWMenrich
PWMenrich
8.5 years ago
sekawaiwai2006
▴ 20
2
votes
3
replies
2.1k
views
visualing pwm motif on a DNAstring
pwmenrich
dnastringset
updated 8.8 years ago by
Robert Stojnic
▴ 50 • written 8.8 years ago by
sekawaiwai2006
▴ 20
0
votes
0
replies
1.5k
views
Import motifs in .meme format in MotifDB
motfdb
pwmenrich
meme
8.9 years ago
enricoferrero
▴ 660
0
votes
3
replies
1.7k
views
motif scanning using position frequncy matrix of motif in a given set of DNAstringset sequnces?.
motifdb
matchpwm
motif
pwmenrich
pwm
9.2 years ago
vinod.acear
▴ 50
0
votes
1
reply
2.4k
views
non-numeric argument to binary operator error with makeBackground() in PWMEnrich
pwmenrich
MotifDB
updated 9.2 years ago by
Robert Stojnic
▴ 50 • written 9.2 years ago by
elliott77
• 0
2
votes
1
reply
1.3k
views
[PWMEnrich] Enrichment p-values on human sequences
pwmenrich
log
updated 9.4 years ago by
Robert Stojnic
▴ 50 • written 9.4 years ago by
enricoferrero
▴ 660
1
vote
3
replies
1.7k
views
getBackgroundFrequencies for Arabidopsis
pwmenrich
bsgenome
9.4 years ago
oliwindram
▴ 10
0
votes
5
replies
2.8k
views
Motif enrichment analysis: Error in transfac format and background frequencies from BSGenome
BSgenome
convert
BSgenome
PWMEnrich
MotifDb
updated 10.4 years ago by
Robert Stojnic
▴ 80 • written 10.4 years ago by
deepti anand
▴ 50
0
votes
0
replies
901
views
PWMEnrich::sequenceReport() and 'res' global variable
PWMEnrich
PWMEnrich
10.6 years ago
enricoferrero
▴ 660
0
votes
8
replies
1.8k
views
plotpfm has been removed in PWMEnrich?
PWMEnrich
PWMEnrich
updated 11.1 years ago by
Robert Stojnic
▴ 80 • written 11.1 years ago by
Fabrice Tourre
▴ 970
0
votes
1
reply
1.4k
views
PWMEnrich binding site position
PWMEnrich
PWMEnrich
updated 11.4 years ago by
Robert Stojnic
▴ 50 • written 11.4 years ago by
Guest User
★ 13k
16 results • Page
1 of 1
Recent ...
Replies
Comment: Problems with oarfish + tximport + swish
by
Michael Love
43k
Great thanks for posting the issue and sticking with it Annaleigh
Comment: Problems with oarfish + tximport + swish
by
brown.annaleigh
• 0
Awesome possum! Update works!! Thank you so much for the help and guidance!
Comment: Postdoctoral Researcher in Spatial Gene Regulatory Networks underlying Stomatal
by
iqratechnology4
• 0
Iqra Technology is IT Solutions and Services Company. We are salesforce and Microsoft partner company. https://iqratechnology.com/
Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
by
James W. MacDonald
67k
> BTW, shouldn't you be using keep.lib.sizes = F and re-do the calcNormFactors() after filtering of the dglst low-expression ENSGs, as Gord…
Comment: Problems with oarfish + tximport + swish
by
Michael Love
43k
Let me see if I can add some code to tximeta to cover this case. I've added an argument `skipRanges` in devel branch which should allow: …
Votes
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Answer: Limma Interaction Effect with Covariates
Awards
• All
Popular Question
to
Gordon Smyth
52k
Popular Question
to
Bob
▴ 10
Popular Question
to
shepherl
4.1k
Scholar
to
James W. MacDonald
67k
Popular Question
to
Assa Yeroslaviz
★ 1.5k
Locations
• All
United States,
1 hour ago
United States,
2 hours ago
Hong Kong,
2 hours ago
WEHI, Melbourne, Australia,
3 hours ago
The city by the bay,
4 hours ago
Traffic: 445 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6