Bioconductor PCAtools

Showing : PCAtools • reset

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COTAN PCAtools

4 weeks ago Silvia • 0

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768

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DESeq2 eigencorplot PCAtools

9 months ago BioinfGuru ▴ 70

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508

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DESeq2 PCAtools

updated 10 months ago by Michael Love 43k • written 10 months ago by Aaliya • 0

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1.8k

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DESeq2 RSTUDIO PCAtools

updated 10 months ago by swbarnes2 ★ 1.4k • written 10 months ago by Aaliya • 0

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1.6k

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edgeR PCAtools

written 10 months ago by Fabian • 0

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5.1k

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ellipse RNAseq PCAtools

updated 22 months ago by CP • 0 • written 3.7 years ago by elizabethe819 • 0

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1.6k

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Biplot FactoMineR proteomics PCAtools ellipse

updated 2.1 years ago by Kevin Blighe ★ 4.0k • written 2.1 years ago by M Tuhin • 0

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1.5k

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illumina PCAtools PCA

updated 2.3 years ago by Kevin Blighe ★ 4.0k • written 2.3 years ago by ilaria.debenedictis • 0

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1.1k

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PCAtools bioconductor

updated 2.6 years ago by James W. MacDonald 68k • written 2.6 years ago by pterry • 0

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1.8k

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PCAtools pcaExplorer pcaMethods

updated 2.7 years ago by Federico Marini ▴ 180 • written 2.7 years ago by m610110001 • 0

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3.6k

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PCAtools edgeR pcaExplorer RNASeq RNAseq123

2.8 years ago Alan • 0

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1.2k

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PCAtools

3.9 years ago luca.s ▴ 50

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3.5k

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PCAtools

updated 4.1 years ago by Kevin Blighe ★ 4.0k • written 4.1 years ago by Terra • 0

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3.9k

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biplot PCA RNASeq PCAtools

updated 4.2 years ago by Kevin Blighe ★ 4.0k • written 4.2 years ago by mschmidt ▴ 10

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2.2k

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PCAtools biplot DESeq2 RNASeq PCA

updated 4.2 years ago by Kevin Blighe ★ 4.0k • written 4.2 years ago by ecg1g15 ▴ 30

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1.8k

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PCATools

updated 4.3 years ago by Kevin Blighe ★ 4.0k • written 4.3 years ago by oakhamwolf • 0

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2.1k

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EDA pcaExplorer PCAtools PCA

updated 3.2 years ago by Miguel ▴ 20 • written 4.5 years ago by k.vitting.seerup ▴ 120

17 results • Page 1 of 1

Recent ...

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Comment: Differential variance analysis - can i use deseq2 by Michael Love 43k

VST is valid for working with expression data on a variance stabilized scale, so yes. There are many papers that have used VST and then com…

Answer: Use of limma R package with targeted proteomics for DE analysis by Gordon Smyth 52k

It is usual to analyse log normalized values from Olink in limma. Just a straight log transformation should be sufficient. We find that `tr…

Comment: WGCNA by pammelala304 • 0

Thank you for your time and effort. I am so grateful! Play game [block blast](https://blockblastpuzzle.io) free.

Comment: Does anyone have the command to download all of the core_nt using blast_db_get() by Matthew Thornton ▴ 380

Ok. So I guess the core_nt is over 300Gb compressed. I can do it, but maybe it is better to just use ncbi-tools over the internet and just…

Comment: normalizatino of dna methylation EPIC data by user_bioinfo • 0

yes actually that's why I did, and its all good! thank you for your response

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Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

Answer: normalizatino of dna methylation EPIC data

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Suggesting changing the "reply-to" field to the mailing list address.

Answer: UniProt.ws query for single UniRef90 ID takes several minutes

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Popular Question to Mark Dunning ★ 1.1k