Bioconductor PCAtools

Showing : PCAtools • reset

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COTAN PCAtools

10 weeks ago Silvia • 0

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875

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DESeq2 eigencorplot PCAtools

10 months ago BioinfGuru ▴ 70

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541

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DESeq2 PCAtools

updated 11 months ago by Michael Love 43k • written 11 months ago by Aaliya • 0

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2.1k

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DESeq2 RSTUDIO PCAtools

updated 11 months ago by swbarnes2 ★ 1.4k • written 11 months ago by Aaliya • 0

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1.8k

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edgeR PCAtools

written 12 months ago by Fabian • 0

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5.4k

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ellipse RNAseq PCAtools

updated 24 months ago by CP • 0 • written 3.9 years ago by elizabethe819 • 0

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1.7k

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Biplot FactoMineR proteomics PCAtools ellipse

updated 2.2 years ago by Kevin Blighe ★ 4.0k • written 2.2 years ago by M Tuhin • 0

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1.6k

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illumina PCAtools PCA

updated 2.4 years ago by Kevin Blighe ★ 4.0k • written 2.4 years ago by ilaria.debenedictis • 0

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1.1k

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PCAtools bioconductor

updated 2.7 years ago by James W. MacDonald 68k • written 2.7 years ago by pterry • 0

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2.0k

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PCAtools pcaExplorer pcaMethods

updated 2.8 years ago by Federico Marini ▴ 180 • written 2.8 years ago by m610110001 • 0

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3.7k

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PCAtools edgeR pcaExplorer RNASeq RNAseq123

3.0 years ago Alan • 0

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1.2k

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PCAtools

4.0 years ago luca.s ▴ 50

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3.6k

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PCAtools

updated 4.2 years ago by Kevin Blighe ★ 4.0k • written 4.2 years ago by Terra • 0

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4.0k

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biplot PCA RNASeq PCAtools

updated 4.3 years ago by Kevin Blighe ★ 4.0k • written 4.3 years ago by mschmidt ▴ 10

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2.3k

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PCAtools biplot DESeq2 RNASeq PCA

updated 4.4 years ago by Kevin Blighe ★ 4.0k • written 4.4 years ago by ecg1g15 ▴ 30

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1.9k

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PCATools

updated 4.5 years ago by Kevin Blighe ★ 4.0k • written 4.5 years ago by oakhamwolf • 0

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2.2k

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EDA pcaExplorer PCAtools PCA

updated 3.3 years ago by Miguel ▴ 20 • written 4.6 years ago by k.vitting.seerup ▴ 120

17 results • Page 1 of 1

Recent ...

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Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30

I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

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Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

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