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PAM50
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how to infer missing PAM50 molecular subtypes in TCGA-BRCA dataset downloaded with TCGABiolinks?
tcgabiolinks
tcga-brca
gdc
pam50
rna-seq
7.0 years ago
pfrancislyon
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How to calculate risk of relapse based on subtypes and proliferation (ROR-P) PAM50 sub-typing?
RORP
PAM50
8.9 years ago
g_draculla
▴ 10
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Answer: Version conflict when pushing to scQTLtools devel branch
by
shepherl
4.1k
There is a Bioconductor release today. There were notifications on the bioc-devel mailing list https://stat.ethz.ch/pipermail/bioc-devel…
Comment: DiffBind can't find a DAR
by
Mengjun
• 0
The details about this question: I have 4 samples with 2 conditions( ctrl_1, ctrl_2, ko_1, ko_2), i use these 4 samples as input. Here is …
Comment: DiffBind can't find a DAR
by
Mengjun
• 0
Thank you very much for pointing out this shortcoming. I will improve it.
Comment: samtools loading in R
by
Charlie
• 0
This is obviously a very late answer but I had a similar error: > sh: samtools: command not found > > sh: samtools: command not found > …
Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label
by
njmcdirect
• 0
https://www.www-njmcdirect.run/
Votes
Comment: biomaRt server error, and mirrors do not help
Bioconductor 3.21 is Released!
DiffBind - question on the use of filtered or unfiltered input data
Answer: Enhanced Volcano Error when drawing connectors
Answer: Origin of the labels for the SingleCellMultiModal dataset
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