0
votes
4
replies
644
views
0
votes
2
replies
900
views
Recent ...
Replies
Comment: Why did PCA plots look exactly the same after adjusting for batch covariate in D
by
Quang
▴
10
Also, Michael, when I used SVA in addition, so I have the `design = ~ Date_lysed + SV1 + condition_subset`, how might I visualise the adjus…
Comment: Differential variability modelling with vst() expression
by
Michael Love
43k
See Gordon's reply below for an implementation you can use directly.
Comment: Differential variability modelling with vst() expression
by
jtsy6383
•
0
Thanks for the quick and reassuring response Mike! Some follow-ups if I may on the second point.
1) Any comment on the appropriate summary…
Comment: DESeq2 analysis with transcript counts
by
Sink
•
0
Your workflow seems good for a beginner! Using nf-core for RNASeq processing and DESeq2 for differential expression analysis is a standard …
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
by
ATpoint
★
4.6k
Annotation packages have their value. They are a convenient and stable way to make annotations accessible inside R, they are version-contro…
Votes
Awards
• All
Popular Question to
svlachavas
▴
840
Popular Question to
Terra
•
0
Popular Question to
Assa Yeroslaviz
★
1.5k
Popular Question to
nurkenber
•
0
Popular Question to
Dario Strbenac
★
1.5k
Locations
• All
Germany/Heidelberg/German Cancer Research Center, just now
United Kingdom, 4 minutes ago
India, 4 minutes ago
Germany, 21 minutes ago
Sweden, 41 minutes ago
Germany/Heidelberg/German Cancer Research Center, just now
United Kingdom, 4 minutes ago
India, 4 minutes ago
Germany, 21 minutes ago
Sweden, 41 minutes ago
Traffic: 723 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6