Showing : Oryza_sativa • reset
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pathview - a species in KEGG pathway but not in 'korg'
pathview KEGG Oryza_sativa
17 months ago Jiyoung Lee • 0
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Does EnrichmentBrowser package support analysis of RNA-seq data from Oryza sativa (rice)?
EnrichmentBrowser Oryza_sativa
3.4 years ago sjw • 0
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5
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install Annotation Packages BSgenome.Osativa.MSU.MSU7 failed
Oryza_sativa AnnotationDbi
updated 3.7 years ago by 16k • written 3.7 years ago by • 0
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Comment: DESeq2 rerun returns different results by ATpoint ★ 4.5k
DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…
Answer: [How to construct a model.matrix ] by Gordon Smyth 51k
> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0
Hi Robert, Thank you for the explanation, But I am still little bit confused, Is the annotation package (TxDb.Hsapiens.UCSC.hg38.knownGene)…
Comment: Merge Replicates vs Mixed Model by abadgerw • 0
@gabrielhoffman any insight?
Comment: makeContrastsDream for Interaction by abadgerw • 0
@gabrielhoffman any insight?
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Answer: [How to construct a model.matrix ]
Answer: Handling biological replicates in DESeq2
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