Bioconductor NormalyzerDE

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DESeq2 WGCNA Normalization NormalyzerDE BatchEffect

updated 23 months ago by ATpoint ★ 4.7k • written 24 months ago by suphamon.j ▴ 20

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NormalyzerDE

updated 2.9 years ago by Jakob Willforss • 0 • written 3.0 years ago by Alejandro • 0

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normalyzerde

5.3 years ago Jakob Willforss • 0

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normalyzerde

5.9 years ago Jakob Willforss • 0

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Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

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