Bioconductor NMF

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4.7k

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NMF Biobase

updated 2.8 years ago by shepherl 4.1k • written 2.8 years ago by Abhishek • 0

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2.1k

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NMF scater

4.4 years ago lirongrossmann ▴ 50

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563

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NMF ZeiselBrainData

4.7 years ago sofia.puvogel • 0

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1.8k

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MutationalPatterns NMF

5.8 years ago TRASA • 0

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3.6k

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somaticsignatures NMF

updated 6.3 years ago by Xin • 0 • written 6.7 years ago by aslam.mohammed398 • 0

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1.0k

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NMF log2 classification bioconductor

6.7 years ago Seymoo • 0

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1.3k

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NMF somaticsignatures R 3.4.3

updated 7.0 years ago by shepherl 4.1k • written 7.0 years ago by samuel.fux • 0

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3.5k

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somaticsignatures NMF

updated 7.4 years ago by grimmmmer • 0 • written 8.1 years ago by ns • 0

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2.8k

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deseq2 combat outliers NMF

updated 7.8 years ago by Michael Love 43k • written 7.8 years ago by noname • 0

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1.3k

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NMF minfi

9.0 years ago yura.grabovska ▴ 30

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1.4k

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affy coefmap nmf

updated 9.2 years ago by James W. MacDonald 68k • written 9.2 years ago by thrabe • 0

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1.9k

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sva somaticsignatures batch effect nmf

updated 9.3 years ago by Jeff Leek ▴ 650 • written 9.3 years ago by kw10 • 0

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1.7k

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NMF bioconductor R

updated 9.7 years ago by Martin Morgan 25k • written 9.7 years ago by Deepak Tanwar ▴ 10

13 results • Page 1 of 1

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Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

Votes

Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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