Bioconductor NMF

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4.6k

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NMF Biobase

updated 2.8 years ago by shepherl 4.1k • written 2.8 years ago by Abhishek • 0

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2.1k

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NMF scater

4.4 years ago lirongrossmann ▴ 50

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560

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NMF ZeiselBrainData

4.6 years ago sofia.puvogel • 0

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1.7k

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MutationalPatterns NMF

5.8 years ago TRASA • 0

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3.6k

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somaticsignatures NMF

updated 6.3 years ago by Xin • 0 • written 6.6 years ago by aslam.mohammed398 • 0

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991

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NMF log2 classification bioconductor

6.7 years ago Seymoo • 0

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1.3k

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NMF somaticsignatures R 3.4.3

updated 7.0 years ago by shepherl 4.1k • written 7.0 years ago by samuel.fux • 0

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3.5k

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somaticsignatures NMF

updated 7.4 years ago by grimmmmer • 0 • written 8.1 years ago by ns • 0

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2.8k

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deseq2 combat outliers NMF

updated 7.7 years ago by Michael Love 43k • written 7.7 years ago by noname • 0

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1.3k

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NMF minfi

9.0 years ago yura.grabovska ▴ 30

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1.4k

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affy coefmap nmf

updated 9.1 years ago by James W. MacDonald 68k • written 9.1 years ago by thrabe • 0

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1.9k

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sva somaticsignatures batch effect nmf

updated 9.3 years ago by Jeff Leek ▴ 650 • written 9.3 years ago by kw10 • 0

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1.7k

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NMF bioconductor R

updated 9.6 years ago by Martin Morgan 25k • written 9.6 years ago by Deepak Tanwar ▴ 10

13 results • Page 1 of 1

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Comment: Conumee for EPIC and EPICv2 copy number by Adam • 0

As described on the [github](https://github.com/hovestadtlab/conumee2) the way to do this is using array_type = c("EPIC", "EPICv2") This i…

Comment: graper 1.22 Build is Broken by shepherl 4.1k

This is not an appropriate place to report this. this is for usage questions. maintainers are notified automatically when it is failing on …

Comment: graper 1.22 Build is Broken by shepherl 4.1k

This post does not fit the theme of this forum.

Comment: Unbalanced experiment with multiple samples from each patient. by canarias • 0

Hi Aaron, I'm faced with an analysis that has basically the same problem as OP had, but is probably even more unbalanced: In most cases, I…

Comment: Gene Set Enrichment Analysis in Bioconductor course by info ▴ 10

If you are interested in Gene Set Enrichment Analysis in R, you can still join us next week for this 4-day Physalia course on GSEA in R and…

Votes

A: Unbalanced experiment with multiple samples from each patient.

Unbalanced experiment with multiple samples from each patient.

Answer: Vertical line at A=0, nothing else, on MA plot

Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct

Answer: Group-specific condition effects with individuals nested: matrix is not full ra

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