Showing : MicroarrayData • reset
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Consistent Decimals In Data After Antibody Array Background Correction Using Limma:nec Function
limma MicroarrayData Normalization
16 days ago • updated 15 days ago Ai • 0
1
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2
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413
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Problem with maplot {affy} method when using rma {affy} method output as its input
maplot_function rma_function ExpressionSet MicroarrayData affy
7 months ago Mj.A. • 0
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7
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914
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DEG Filtering
MicroarrayData limma Genefiltering
updated 7 months ago by 51k • written 8 months ago by • 0
2
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6
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987
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limma: vooma mean-variance trend and data filtration
MicroarrayData limma
8 months ago Lily Cheang ▴ 10
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3
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842
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Is it possible to extract the expression of a single group without making comparisons?
MicroarrayData hta20transcriptcluster.db
updated 15 months ago by 51k • written 15 months ago by • 0
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8
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Can the limma package be applied to Log2 RUV-normalized data?
RUVnormalizeData MicroarrayData limma
updated 11 months ago by • 0 • written 18 months ago by ▴ 10
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1.0k
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Error in getCdfInfo(object) :
MicroarrayData
19 months ago kobra • 0
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0
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837
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Aligning Clariom D against reference Genome and transcriptome pipeline
Clariom Align MicroarrayData Alignment Microarray
21 months ago agamemnon • 0
2
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1
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708
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Doubts about manipulation and annotation of microarray files deposited at GEO
MicroarrayData Annotation GEOdata
updated 21 months ago by 67k • written 21 months ago by • 0
0
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1
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832
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Micro Array GEO data analysis
GEOquery MicroarrayData Normalization Microarray NanoStringDiff
updated 21 months ago by 67k • written 21 months ago by • 0
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2
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1.2k
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Remove batch effect between microarray data
Microarray DifferentialExpression limma MicroarrayData removebatcheffect
22 months ago dqt • 0
2
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2
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721
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2-Way Repeated Measures ANOVA - Affymetrix
AffymetrixChip MicroarrayData Anova
2.1 years ago evan.j.williams ▴ 10
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17
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2.9k
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Advice for the analysis of microarray data with limma
Microarray MicroarrayData limma
updated 21 months ago by 51k • written 2.1 years ago by • 0
0
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1
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689
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Finding negative control in the array using R
R MicroarrayData
updated 2.2 years ago by 67k • written 2.2 years ago by • 0
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0
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648
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Filtering single-channel Affymetrix probes
filtering probe MicroarrayData
2.3 years ago Fatemeh • 0
2
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2
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1.3k
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the difference between getGEO and getGEOSuppFiles
MicroarrayData
2.3 years ago Fatemeh • 0
1
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1
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764
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IS DGE possible with normalized microarray expression data and Limma ?
limma MicroarrayData
updated 2.3 years ago by 67k • written 2.3 years ago by • 0
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1
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880
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Compare different cell lines with tissues using limma
limma MicroarrayData Microarray Agilent
updated 2.4 years ago by 51k • written 2.4 years ago by • 0
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8
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1.8k
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Finding differentially expressed genes in a prospective cohort study
limma MicroarrayData Microarray
2.4 years ago YC • 0
1
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2
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1.0k
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Problem with results of Differential expression in Affymetrix microarray
limma MicroarrayData Microarray Affymetrix
2.5 years ago Mikołaj Mierzejewski • 0
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2
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1.4k
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Affymetrix analysis of microarray by using Limma
limma MicroarrayData Microarray Affymetrix
2.5 years ago Mikołaj Mierzejewski • 0
0
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2
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960
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Identifying multiple mappings with pd.clariom.d.human
clariomdhumantranscriptcluster.db MicroarrayData Microarray pd.clariom.d.human
2.6 years ago • updated 2.5 years ago amir.rakhimov.b • 0
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2
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969
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How to extract probe level intensity after rma() normalization
MicroarrayData AffymetrixChip
updated 2.6 years ago by 67k • written 2.6 years ago by • 0
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4
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1.1k
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getProbeInfo and exprs return two different dimensions
CELfile MicroarrayData AffymetrixChip
2.7 years ago • updated 2.6 years ago Haoran • 0
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1
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1.1k
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R CODE TO FIND AGGREGATE FOR DUPLICATES
aggregateBioVar DEGseq MicroarrayData
updated 3.0 years ago by 67k • written 3.0 years ago by • 0
0
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1
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882
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Import and Analyze 4 GSE12050_GSM304448.gpr microarrays files
.gpr raw Agilent MicroarrayData import
updated 3.1 years ago by 51k • written 3.1 years ago by • 0
1
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3
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1.4k
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Microarray - Illumina Metadata
limma GEO MicroarrayData affy
updated 3.1 years ago by 67k • written 3.2 years ago by • 0
0
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2
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753
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Adj. P-value identical and high for all the genes
MicroarrayData
3.2 years ago Adriana • 0
1
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1
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1.4k
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Extracting a list of genes from the Gene Expression Omnibus with Geoquery.
Microarray GEOquery cancerdata MicroarrayData
updated 3.2 years ago by 67k • written 3.2 years ago by ▴ 50
3
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5
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2.0k
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Use of arrayWeights with two treatment groups
Microarray arrays limma MicroarrayData
updated 3.4 years ago by 51k • written 3.5 years ago by • 0
1
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1
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1.7k
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How do I adjust for other factors in Limma differential expression analysis?
limma Microarray MicroarrayData arrays
updated 3.5 years ago by ★ 4.0k • written 3.5 years ago by • 0
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2
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2.3k
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How to exclude outlier (Microarray ) from PCA in R
OutlierD pcaMethods MicroarrayData Microarray
3.6 years ago waiyin0923 • 0
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2
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1.9k
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WGCNA - Outliers after creating sample tree
MicroarrayData WGCNA Microarray
3.8 years ago • updated 3.7 years ago jpwl2 • 0
8
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4
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1.5k
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Limma outputs different results for same sample?
topTable MicroarrayData ebayes limma Microarray
3.8 years ago snijesh ▴ 200
3
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9
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1.7k
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limma analysis when only Cy5 was used
MicroarrayData limma Microarray
3.8 years ago Daniel.Schnell • 0
35 results • Page 1 of 1
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Answer: Unlocking Potential: NURS FPX Strategies and Insights by efsane_kral2000 • 0
https://diendannhansu.com/threads/hayal-sohbet-odalari.667004/ https://forum.realdigital.org/u/serkan https://animefagos.com/miembros/ser…
Comment: Unlocking Potential: NURS FPX Strategies and Insights by efsane_kral2000 • 0
https://www.hayalsohbet.net https://www.yerlichat.com https://www.yerlichat.net https://www.mavisim.net https://www.hayalchat.com http…
Comment: Is it recommended to analyze different tissues together when using edgeR by Gordon Smyth 51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data by Melisa Tecik • 0
Thanks a lot for the help. You saved my day
Answer: Differene between the Wald and LRT test for time-series gene expression data by James W. MacDonald 67k
The advantage to using the LRT is that it's an omnibus test that tells you if there are changes at any time point. If you have lots of time…
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Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
Answer: Allele frequencies for ALL alleles of one SNP ?
Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Using Affymetrix Custom Array
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Popular Question to Fred Hutch (Recruiting) ▴ 40
Scholar to Gordon Smyth 51k
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