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Michael Love
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0
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3
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1.2k
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DESeq2 time course with two genotypes
deseq2
timecourse
michael love
multiple time points
5.2 years ago
cp1015
• 0
0
votes
4
replies
869
views
DESeq2 Design Formula
DESeq2
michael love
updated 6.0 years ago by
Michael Love
43k • written 6.0 years ago by
gkuffel
▴ 10
0
votes
1
reply
1.3k
views
DESeq2 PCA plotting
deseq2
michael love
updated 6.1 years ago by
Michael Love
43k • written 6.1 years ago by
sam.far.7
• 0
1
vote
11
replies
1.9k
views
Need help with DESeq2's contrast feature
deseq2
michael love
updated 6.3 years ago by
Michael Love
43k • written 6.3 years ago by
Ashu
▴ 10
2
votes
3
replies
1.8k
views
DESeq2 for time series using time as continuous and looking at effect of time on DE
deseq2
timecourse
multiple time points
mlr
michael love
updated 6.5 years ago by
Michael Love
43k • written 6.5 years ago by
ap874
• 0
5
votes
10
replies
13k
views
Constructing tx2gene for Salmon txImport Quantification using Gencode Mouse Transcript Annotation
Michael Love
Salmon
tximport
tx2gene
updated 6.8 years ago by
Michael Love
43k • written 6.8 years ago by
pvd2107
▴ 30
6 results • Page
1 of 1
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Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
by
freemanmclaughlin9969289
• 0
Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…
Comment: How to get around the warning message: mzR has been built against a different Rc
by
Nan
• 0
Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…
Answer: EuroBioC2023 abstract submission closing soon!
by
excess.gecko.shso
• 0
Don't miss out! EuroBioC2023 abstract submissions are nearing the deadline. Sharpen your scientific [Wordle Game][1] skills and submit your…
Answer: EuroBioC2024 abstract submission is open!
by
excess.gecko.shso
• 0
EuroBioC2024 abstract submissions are now open! Join the Oxford conference from Sep 4-6. Submit your abstract by April 26 for short talks, …
Comment: Cross-validation with multiple control subgroups in limma
by
Ali Barry
▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Votes
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
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