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MethylMix
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How can I download Methylation data for MethylMix package. (unusual error popped)
MethylMix
3.3 years ago
Shloka Negi
• 0
0
votes
1
reply
908
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how to paralelize this R script in a HPC cluster using Slurm Workload Manager?
methylation
epigenomics
slurm
mpi
methylmix
updated 3.9 years ago by
Kevin Blighe
★ 3.9k • written 3.9 years ago by
parra.sev
▴ 20
0
votes
1
reply
822
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stuck in "Finding nonparametric adjustments" with MethylMix package.
MethylMix
updated 4.0 years ago by
Kevin Blighe
★ 3.9k • written 4.0 years ago by
sdjnchen
• 0
0
votes
0
replies
709
views
Methylmix results are a bit different from beta values results
cancer
methylmix
methylation
betavalues
DMvalues
4.5 years ago
luciomora8
• 0
1
vote
2
replies
987
views
How to handle big data sets (>10GB) in Bioconductor packages?
big data
methylmix
memory problem
updated 5.8 years ago by
Martin Morgan
25k • written 5.8 years ago by
perdedorium
• 0
0
votes
0
replies
807
views
MethylMix takes so much time for preprocess step
MethylMix
6.0 years ago
serbulentu
• 0
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Comment: limma comparison for small sample size and how to get covariance matrix
by
Gordon Smyth
51k
Your MDS plot is better than before, but you are still not following the recommendation for making for making such plots given in the limma…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Votes
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
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