Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
MethylMix
•
reset
0
votes
0
replies
1.1k
views
How can I download Methylation data for MethylMix package. (unusual error popped)
MethylMix
4.1 years ago
Shloka Negi
• 0
0
votes
1
reply
1.1k
views
how to paralelize this R script in a HPC cluster using Slurm Workload Manager?
methylation
epigenomics
slurm
mpi
methylmix
updated 4.7 years ago by
Kevin Blighe
★ 4.0k • written 4.8 years ago by
parra.sev
▴ 20
0
votes
1
reply
1.0k
views
stuck in "Finding nonparametric adjustments" with MethylMix package.
MethylMix
updated 4.8 years ago by
Kevin Blighe
★ 4.0k • written 4.8 years ago by
sdjnchen
• 0
0
votes
0
replies
906
views
Methylmix results are a bit different from beta values results
cancer
methylmix
methylation
betavalues
DMvalues
5.3 years ago
luciomora8
• 0
1
vote
2
replies
1.2k
views
How to handle big data sets (>10GB) in Bioconductor packages?
big data
methylmix
memory problem
updated 6.6 years ago by
Martin Morgan
25k • written 6.6 years ago by
perdedorium
• 0
0
votes
0
replies
957
views
MethylMix takes so much time for preprocess step
MethylMix
6.8 years ago
serbulentu
• 0
6 results • Page
1 of 1
Recent ...
Replies
Comment: GSEA preranked analysis downstream of DEseq2
by
Ajay
• 0
`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1] [1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/
Comment: error in ChAMP loading file
by
janwilseo
• 0
Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)
Answer: CluserProfiler message "No gene can be mapped"
by
James W. MacDonald
68k
Two things. First, the order of your term2gene is backwards (should be term and then gene, like the name), and by default `enricher` adjust…
Comment: Controlling for batch and estrus cycle using DESeq2 in RNA-seq analysis
by
donnycrimson
• 0
One potential workaround might be to adjust for these factors using a combination of design matrices perhaps including batch as a covariate…
Comment: DESeq2 Design controlling for gender
by
donnycrimson
• 0
On a lighter note, while you are tackling such complex data, you might enjoy a quick break playing the [Slope Game](https://slopegame.lol)…
Votes
DiffBind; Error: No sites have activity greater than filter value
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
How to remove X & Y chromosome genes from RNAseq data
Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?
A: Unbalanced experiment with multiple samples from each patient.
Awards
• All
Popular Question
to
Dario Strbenac
★ 1.6k
Popular Question
to
etiennedanis
• 0
Popular Question
to
javier.ruizramirez
• 0
Autobiographer
to
Paul Harrison
▴ 100
Popular Question
to
mohammedtoufiq91
▴ 10
Locations
• All
EMBL Heidelberg,
2 hours ago
Australia,
2 hours ago
Netherlands,
4 hours ago
United States,
5 hours ago
The city by the bay,
6 hours ago
Traffic: 648 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6