Bioconductor MatrixEQTL

Showing : MatrixEQTL • reset

0

votes

1

reply

835

views

matrixeqtl sva

updated 18 months ago by James W. MacDonald 68k • written 18 months ago by Shila • 0

0

votes

1

reply

793

views

MatrixEQTL

updated 3.1 years ago by Michael Love 43k • written 3.1 years ago by Neha • 0

1

vote

3

replies

1.5k

views

hg19 liftover matrixeqtl DMRcate

updated 5.8 years ago by James W. MacDonald 68k • written 5.8 years ago by yoursbassanio ▴ 10

3 results • Page 1 of 1

Recent ...

Replies

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

Comment: concentration tables suitable as input for new packages? by wilkinson • 0

I am grateful for your response. Software such as "Spectra" may parse MS-data to generate tables of concentrations, for instance. But inste…

Comment: Removing UTR from GTF for gene quantification by ATpoint ★ 4.7k

Consider asking at biostars or bioinformatics reddit, since this is not directly related to a Bioconductor problem. Anyway, a couple of th…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Hoover • 0

I got it! ([Drift Boss][1]) [1]: https://driftbossgame.co

Votes

How to remove genes with 0 counts in tximport?

Awards • All

Popular Question to Lluís Revilla Sancho ▴ 760