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pepXMLTab error reading Mascot pepXML file
pepXMLTab
Mascot
pepXML file
4.7 years ago
laura.fancello
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Comment: 'path' must be string
by
cpierce2
• 0
Sorry for the garbled code. One more thing, again I appreciate it. ``` Error in startsWith(probeAssay[["RTS_ID"]][1L], "RNA") : …
Comment: Error running tximeta
by
daria.igudesman
• 0
Thank you, Michael, If I can follow up with a couple of questions: 1. I did indeed move the quant.sf files. I can move them back into the…
Comment: DGE with a Continuous Variable
by
Michael Love
42k
The fitted counts in mu will work but they contain size factor scaling. So you can divide those by `sizeFactors(dds)`. ``` mu <- assays(dd…
Comment: DGE with a Continuous Variable
by
picasa1983
• 0
I read in a Biostars thread that the fitted coefficient is in `assays(dds)[["mu"]]`, but I'm not sure if this is correct. Would this be th…
Answer: 'path' must be string
by
James W. MacDonald
66k
When you are posting code, please either add a triple backtick (the top left key on a QWERTY keyboard) to the line preceding the code and t…
Votes
Comment: DGE with a Continuous Variable
The issue with SGSeq_analyzeFeatures() returns errors on BAM files
A: question about subsetting SGSeq results by different categories of splice events
A: question about subsetting SGSeq results by different categories of splice events
A: Extract sample information from own BAM files using SGSeq
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