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updated 2.3 years ago by
Guandong Shang
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written 4.9 years ago by
heir_of_isildur88
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5.1 years ago
sharvari gujja
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Comment: WGCNA with TPM tables
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ATpoint
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WGCNA is not a Bioconductor package, but generally:
If you want to do serious analysis then find the raw data. There is no guarantee what …
Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
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You are an absolute lifesaver, thank you so much for the clarification!
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The `EnsDb.Mmusculus.v79` package is mm38, not mm39. If you want a current `EnsDb`, use `AnnotationHub`
```
> library(AnnotationHub)
>…
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I'm adding my comment to the threaded section ...
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If you do it this way, the dispersion estimates would be much higher than they should (as the cell type difference is not accounted for in …
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