Bioconductor Isoforms

Showing : Isoforms • reset

votes

replies

1.1k

views

isoforms DESeq2

3.0 years ago arfranco ▴ 130

vote

replies

2.6k

views

RATs RNA-Seq Isoforms DTU expression

updated 5.7 years ago by fruce_ki ▴ 20 • written 5.7 years ago by UserAnonyme • 0

votes

replies

1.8k

views

isoforms diffrential expression noncoding rna TSIS isoformswitchanalyzeR

6.9 years ago rbenel ▴ 40

votes

replies

1.2k

views

dexseq differential isoform usage isoforms summarizeoverlaps granges

7.0 years ago A ▴ 60

votes

replies

1.7k

views

cummerbund heatmap isoforms transcript_id

8.0 years ago domenico.somma • 0

votes

replies

4.0k

views

dexseq bitseq cuffdiff Differential exon usage isoforms

9.9 years ago • updated 9.8 years ago elle ▴ 10

votes

replies

2.9k

views

edgeR ruvseq rnaseq isoforms

9.9 years ago sergio.espeso-gil • 0

vote

replies

1.6k

views

DEXSeq transcripts isoforms

updated 9.9 years ago by Alejandro Reyes ★ 1.9k • written 9.9 years ago by peter_venhuizen • 0

8 results • Page 1 of 1

Recent ...

Replies

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

Comment: Question on displaying color photo as Greyscale in EBImage by Albert • 0

great and very nice

Votes

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

what the test method for enrichGO in clusterProfiler?

Awards • All