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UniprotKB AC/ID to Entrez ID Conversion
ID
Uniprot
EntrezID
2.7 years ago
tom.kloter
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Reactome pathway names from IDs?
biomart
reactome
reactome.db
id
updated 9.2 years ago by
James W. MacDonald
67k • written 9.2 years ago by
enricoferrero
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Comment: How to sort negative log2FC or FC in RNAseq for GSEA?
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QN
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Thank you ATpoint for your response! In the result of GSEA, like you indicated, there will be gene sets that have positive NES and gene se…
Comment: EdgeR Biological CVs
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ATpoint
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"Joseph" is a spam bot...
Comment: Problems with oarfish + tximport + swish
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Answer: How to sort negative log2FC or FC in RNAseq for GSEA?
by
ATpoint
★ 4.6k
GSEA asks whether there are general shifts in gene expression towards certain terms. Hence, you would not split your results tables but ord…
Comment: EdgeR Biological CVs
by
James
• 0
Thank you Gordon and Joseph. I presume question (1) would be answered by using a prior G0 of 0? For question (2), I was expecting a biolog…
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How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Answer: EdgeR Biological CVs
Comment: EdgeR Biological CVs
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
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