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HiTC
•
reset
0
votes
3
replies
961
views
HiTC import is throwing error
HiTC
importC
sparseMatrix
2.1 years ago
shikha
• 0
0
votes
6
replies
991
views
HiTC problem exporting to my5C
HiTC
HiC-Pro
4.4 years ago
sergio.espeso-gil
• 0
1
vote
3
replies
1.4k
views
A/B compartments computation: control settings
HiTC
updated 3.0 years ago by
ahmed.abbaselmahdi
• 0 • written 5.0 years ago by
Konstantin Okonechnikov
▴ 40
1
vote
5
replies
1.6k
views
visualize Hi-C .cool file in R
Hi-C
HiTC
6.0 years ago
ta_awwad
▴ 10
0
votes
2
replies
1.2k
views
Gene Density computation in pca.hic
HiTC
6.1 years ago
cath
▴ 30
0
votes
5
replies
1.6k
views
HiTC importC not working
HiTC
IRanges
windows
debian
updated 6.3 years ago by
Nicolas Servant
▴ 260 • written 6.3 years ago by
René Wiegandt
• 0
3
votes
5
replies
1.4k
views
normLGF yields non-symetric matrices
HiTC
updated 7.2 years ago by
Nicolas Servant
▴ 260 • written 7.2 years ago by
enrique.vidal
▴ 10
1
vote
10
replies
2.2k
views
FourC object from scratch
hi-c
HiTC
fourcseq
8.7 years ago • updated 8.6 years ago
Nicolas Servant
▴ 260
0
votes
0
replies
1.2k
views
FourC object from scratch
hic-c
hitc
fourcseq
8.7 years ago
Nicolas Servant
▴ 260
4
votes
20
replies
2.5k
views
scaling loess curves
HiTC
gothic
diffhic
HiC
8.8 years ago
Bogdan
▴ 670
0
votes
0
replies
921
views
normalization method for 5C
HiTC
8.9 years ago
Bogdan
▴ 670
0
votes
0
replies
1.1k
views
Problem importing 5C data
importing
HiTC
9.2 years ago
gugpuccio
▴ 10
0
votes
1
reply
2.6k
views
biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene") fails
BSgenome
hexbin
BSgenome
IRanges
genomeIntervals
GenomicRanges
girafe
Rsamtools
HiTC
HiTC
updated 11.3 years ago by
Dan Tenenbaum
★ 8.2k • written 11.3 years ago by
Wim Kreinen
▴ 100
0
votes
4
replies
1.3k
views
genome_intervals and GRange objects/HiTC package
Annotation
HiTC
Annotation
HiTC
updated 11.4 years ago by
Valerie Obenchain
★ 6.8k • written 11.4 years ago by
Hermann Norpois
▴ 170
0
votes
1
reply
1.3k
views
HiTC: problem with HTClist
HiTC
HiTC
updated 11.4 years ago by
Martin Morgan
25k • written 11.4 years ago by
Hermann Norpois
▴ 170
15 results • Page
1 of 1
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Replies
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Answer: unreal negative log2fc values
by
ATpoint
★ 4.2k
I don't see why this is unrealistic. A logFC of -10 is about -1000 on normal scale. The rough difference between the mean of these counts p…
Votes
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
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ATpoint
★ 4.2k
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