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HapMap
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0
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replies
778
views
Do you know a sofware to draw pedigrees + haplotypes?
SequencingData
STR
MutationalPatterns
pedigree
HapMap
3.2 years ago
Negar
• 0
0
votes
0
replies
928
views
Access HapMap from biomart
hapmap
8.7 years ago
jaganmutyala
• 0
2
votes
3
replies
5.4k
views
Linkage disequilibrium with 1000 Genomes/HapMap
HapMap
genomes
HapMap
genomes
10.2 years ago
enricoferrero
▴ 660
0
votes
2
replies
2.3k
views
ensemblVEP, variant_effect_predictor versions and release schedule
Transcription
HapMap
PolyPhen
SIFT
convert
genomes
ensemblVEP
Transcription
HapMap
SIFT
updated 10.7 years ago by
Valerie Obenchain
★ 6.8k • written 10.7 years ago by
Thomas Sandmann
▴ 30
0
votes
0
replies
1.1k
views
Problem in reading SNP hapmap data
SNP
HapMap
SNP
HapMap
11.0 years ago
Xiaolian Yuan
▴ 30
0
votes
1
reply
1.6k
views
DiffBind & Chip-exo
HapMap
HapMap
11.2 years ago
Rory Stark
★ 5.2k
0
votes
0
replies
1.5k
views
the set of SNPs difference between Genome build 37.1 and 37.3
SNP
HapMap
SNP
HapMap
12.1 years ago
shirley zhang
★ 1.0k
0
votes
0
replies
1.0k
views
How to make Illumina cluster files from HapMap
HapMap
HapMap
12.4 years ago
JiangZhengyu
▴ 40
0
votes
1
reply
1.5k
views
Help for snpMatrix
HapMap
HapMap
updated 12.6 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.6 years ago by
MLSC MANIPAL
▴ 120
0
votes
0
replies
1.0k
views
Help to access hapmap using biomart
HapMap
biomaRt
HapMap
biomaRt
12.6 years ago
MLSC MANIPAL
▴ 120
0
votes
0
replies
2.8k
views
Limma - RNA-Seq DE genes - Quantile normalized log transformed RPKM data
HapMap
limma
HapMap
limma
12.8 years ago
Gordon Smyth
51k
0
votes
1
reply
1.7k
views
biomaRt and HapMap
SNP
HapMap
biomaRt
SNP
HapMap
biomaRt
updated 13.2 years ago by
Steffen Durinck
▴ 540 • written 13.2 years ago by
Deidre
▴ 10
0
votes
0
replies
1.3k
views
Illumina CanineHD CNV & crlmm?
GO
HapMap
cdf
affy
crlmm
GO
HapMap
cdf
affy
crlmm
13.8 years ago
Matthew Ritchie
▴ 1000
0
votes
8
replies
2.0k
views
mouse SNPs
SNP
Annotation
GO
HapMap
annotate
SNP
Annotation
GO
HapMap
annotate
14.1 years ago
Glazko, Galina
▴ 350
0
votes
3
replies
1.4k
views
HapMap gene list
GO
HapMap
GO
HapMap
updated 14.2 years ago by
Kasper Daniel Hansen
★ 6.5k • written 14.2 years ago by
noxyport@gmail.com
▴ 20
0
votes
2
replies
1.3k
views
error from rsamtools on 1000 genomes
Cancer
HapMap
Rsamtools
genomes
Cancer
HapMap
Rsamtools
genomes
updated 14.3 years ago by
Martin Morgan
25k • written 14.3 years ago by
Sergii Ivakhno
▴ 100
0
votes
3
replies
1.3k
views
smlSet
SNP
HapMap
GGtools
SNP
HapMap
GGtools
updated 14.5 years ago by
Vincent J. Carey, Jr.
6.7k • written 14.5 years ago by
claire pujoll
▴ 30
0
votes
2
replies
1.3k
views
Strange output in GenABEL convert.snp.ped()
SNP
HapMap
SNP
HapMap
updated 14.7 years ago by
Martin Morgan
25k • written 14.7 years ago by
Paul Geeleher
★ 1.3k
0
votes
0
replies
790
views
Hapmap miRNA expression data
miRNA
HapMap
ArrayExpress
miRNA
HapMap
ArrayExpress
14.8 years ago
Paul Geeleher
★ 1.3k
0
votes
0
replies
1.6k
views
SNPs in High Linkage Disequilibrium
SNP
HapMap
SNP
HapMap
15.3 years ago
palermogp@libero.it
▴ 10
0
votes
3
replies
1.4k
views
Problem with justSNPRMA, library "oligo"
SNP
HapMap
SNP
HapMap
15.7 years ago
alessio boattini
▴ 30
0
votes
2
replies
1.3k
views
Problems with oligo and pd.genomewidesnp.6
SNP
Annotation
HapMap
SNP
Annotation
HapMap
updated 16.4 years ago by
Vincent J. Carey, Jr.
6.7k • written 16.4 years ago by
Jeremy Silver
▴ 10
0
votes
1
reply
1.1k
views
connect to HapMart with biomaRt
HapMap
biomaRt
HapMap
biomaRt
updated 16.4 years ago by
Steffen
▴ 500 • written 16.4 years ago by
Richard Pearson
▴ 390
0
votes
0
replies
1.1k
views
connect to HapMart with biomaRt
HapMap
biomaRt
HapMap
biomaRt
17.7 years ago
Steffen Durinck
▴ 580
24 results • Page
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Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 20
Hi Maria, so what is the code you are using? By the 3rd way to conduct the analysis do you mean looking at the interaction model from part …
Comment: miRTarRnaseq library
by
María Calvo
• 0
Hello, in line with the previous questions, when the miRNA-mRNA interaction analysis is performed (3 rd way to conduct the analysis), I obt…
Answer: heatmap with batch effect
by
James W. MacDonald
67k
You have only one condition in the second batch, so it's not possible to remove the batch effect. You can probably adjust for it somewhat, …
Answer: how do I convert an Ilumn IDREF to a CPG loci
by
James W. MacDonald
67k
``` > library(IlluminaHumanMethylationEPICanno.ilm10b4.hg19) > Locations DataFrame with 865859 rows and 3 columns ch…
Answer: Which input data is acceptable for MAST?
by
Andrew_McDavid
▴ 270
Not too familiar with SCT v2. If it also has a point-mass at zero and the non-zero component is roughly-symmetric, then it might work ok w…
Votes
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Comment: Convert HGVS Representation back to Reference Genome Coordinates
Answer: How to control batch effect if Group and batch are same?
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Ryan C. Thompson
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