Bioconductor HLA

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HLA TxDb.Hsapiens.UCSC.hg38.knownGene

updated 5.1 years ago by kayla.interdonato ▴ 160 • written 5.1 years ago by Kamil Slowikowski ▴ 30

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HLA bioconductor bioinformatics

7.6 years ago justinyi10 ▴ 10

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homo.sapiens HLA

updated 7.9 years ago by James W. MacDonald 67k • written 7.9 years ago by a23451352 • 0

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Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0

how you did it pls explain

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 67k

If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…

Answer: Meffil: error in functional normalization function (Error in rg.to.mu(rg, probes by a.alkema • 0

Oh, that's silly - thanks, will do!

Answer: Meffil: error in functional normalization function (Error in rg.to.mu(rg, probes by James W. MacDonald 67k

This support site is meant to provide support for Bioconductor packages, but `Meffil` is not part of Bioconductor. You could presumably con…

Comment: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

> It looks like the ssgseaParam function might not be passing the > correct parameters to GSVA::gsva() Apparently because of the extra com…

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