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GenomicAlignments - extracting sequence signatures from bam file
bam file HIV cytosine
7.1 years ago achaillon • 0
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Job: Bioinformatician - The Ragon Institute of MGH, MIT and Harvard
bioinformatician job bioinformatics immunology HIV Job
7.9 years ago • updated 7.7 years ago Ragon Institute of MGH, MIT and Harvard • 0
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ComBat
Transcription Genetics Pathways Network Survival Cancer Breast Colon Kidney Leukemia HIV
12.1 years ago SSc Array Core ▴ 10
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Post Doctoral Openings at University of Pittsburgh
Bayesian HIV Bayesian HIV
12.1 years ago Porterfield, Toni ▴ 10
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Correlation analysis
Microbiome HIV Microbiome HIV
updated 13.0 years ago by 21k • written 13.0 years ago by ▴ 20
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eBayes error
HIV HIV
updated 13.8 years ago by 21k • written 13.8 years ago by ▴ 570
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Rtreemix (NEW package)
Cancer HIV Rtreemix Cancer HIV Rtreemix
16.5 years ago Jasmina Bogojeska ▴ 30
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postdoc position available at FHCRC
Cancer HIV Cancer HIV
16.8 years ago Harlan Robins ▴ 10
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Postdoctoral position for 'Statistical Methods in Bioinformatics'
Genetics HIV Genetics HIV
18.0 years ago Adrian Alexa ▴ 400
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Using limma with contrast matrix ,replicate spots, donor effects
HIV limma HIV limma
updated 19.8 years ago by 51k • written 19.8 years ago by ▴ 120
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Re: NA's
HIV HIV
22.7 years ago rgentleman ★ 5.5k
11 results • Page 1 of 1
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Comment: Differene between the Wald and LRT test for time-series gene expression data by Denise • 0
This makes a lot of sense, thank you very much!
Comment: Downloading Metagenomic Data with Higher Taxonomic Units by elozanoe • 0
Hi! I'm facing the same problem. Is there any easy way to output relative abundances of higher taxonomic units (up to kingdom), similar to…
Comment: Is it recommended to analyze different tissues together when using edgeR by Gordon Smyth 51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data by Melisa Tecik • 0
Thanks a lot for the help. You saved my day
Answer: Differene between the Wald and LRT test for time-series gene expression data by James W. MacDonald 67k
The advantage to using the LRT is that it's an omnibus test that tells you if there are changes at any time point. If you have lots of time…
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A: correcting the batch effects in Limma and SVA
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
Answer: Differene between the Wald and LRT test for time-series gene expression data
Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
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