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GenVisR
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GenVisR - adding on genomic positions to CovGen graph
GenVisR
GenCov
21 months ago
Amy_
• 0
3
votes
10
replies
3.0k
views
error in package GenVisR while installing
GenVisR
GenVis
updated 7 months ago by
zlskidmore
▴ 30 • written 23 months ago by
abhisikta
• 0
0
votes
1
reply
1.1k
views
Unable to install GenVisR under most recent R / Bioconductor version; waterfall option mainDropMut is not working
Install
mainDropMut
GenVisR
updated 2.1 years ago by
Hervé Pagès
16k • written 2.1 years ago by
Michel
• 0
0
votes
0
replies
1.7k
views
How to generate a waterfall plot of mutations and CNAs that don't overlap
GenVisR
maftools
2.1 years ago
e
• 0
0
votes
1
reply
1.1k
views
Waterfall failing with custom file: Error in `colnames<-`(`*tmp*`, value = c("sample", "gene", "trv_type")) : attempt to set 'colnames' on an obje…
variants
waterfall
GenVisR
updated 3.6 years ago by
zlskidmore
▴ 30 • written 3.6 years ago by
Jeni
▴ 10
0
votes
1
reply
732
views
Adding layer to legend in waterfall plot
GenVisR
ggplot2
waterfall
4.7 years ago
sheneicechang
• 0
0
votes
0
replies
946
views
Output GenVisR mutation frequency data by gene name instead of by sample name
GenVisR
mutation frequency
R
cancer
bioconductor
4.8 years ago
sheneicechang
• 0
0
votes
1
reply
1.1k
views
how to save picture and add title to waterfall GenVisR mutation analyse?
GenVisr
genvisr
waterfall
mutation
updated 5.6 years ago by
zlskidmore
▴ 30 • written 5.6 years ago by
ZihaoXing
• 0
0
votes
1
reply
877
views
Issues with lohSpec
genvisr
lohSpec
6.0 years ago
dharia.priyadarshani
• 0
0
votes
2
replies
1.2k
views
Copy Number plot cnSpec - how to order samples
genvisr
6.1 years ago
cedric.vmdl
• 0
0
votes
4
replies
2.0k
views
GenVisR- cnSpec CNV plot
GenVisR
6.5 years ago • updated 6.4 years ago
daijieqiong
▴ 10
0
votes
2
replies
1.2k
views
an error in TvTi: package GenVisR
GenVisR
updated 7.4 years ago by
zlskidmore
▴ 30 • written 7.4 years ago by
Bogdan
▴ 670
2
votes
5
replies
2.7k
views
GenVisR Installation error message
genvisR
8.4 years ago • updated 8.3 years ago
Deep Adhya
▴ 20
13 results • Page
1 of 1
Recent ...
Replies
Comment: Ranking the GSEA Results
by
Lluís Revilla Sancho
▴ 730
You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…
Answer: Create a Graph w/ Only the Genes Interaction
by
Antonio
• 0
Thank you all, I solved my issue by creating a for loop. Cheers!
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…
Comment: Trouble Installing DADA2 (warning: R new user)
by
shepherl
3.9k
As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…
Votes
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features
Comment: How to get the DMR?
Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it
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