Bioconductor GSA

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816

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GSEA GSA vst

updated 2.1 years ago by Michael Love 43k • written 2.1 years ago by nhaus ▴ 70

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2.0k

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GSEA GSA

updated 6.3 years ago by Gordon Smyth 52k • written 6.3 years ago by Bogdan ▴ 670

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1.8k

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crlmm gsa microarray illumina

written 6.8 years ago by shaun • 0

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936

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GSA

7.0 years ago Seymoo • 0

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2.5k

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gsea concept gsa

updated 8.0 years ago by Pekka Kohonen ▴ 190 • written 8.0 years ago by Lluís Revilla Sancho ▴ 760

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1.6k

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GSA

updated 8.1 years ago by Martin Morgan 25k • written 8.1 years ago by epercamh • 0

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1.9k

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gsea gsa

updated 8.9 years ago by Axel Klenk ★ 1.1k • written 8.9 years ago by Bogdan ▴ 670

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2.0k

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limma GSA confounding within-pair analysis 450k

9.8 years ago Aileen Bahl ▴ 10

8 results • Page 1 of 1

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Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k

From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…

Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0

Thank you, I will try this and see.

Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0

Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…

Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0

how you did it pls explain

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 68k

If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…

Votes

A: Effect of lfcThreshold on p-value in DESeq2

Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet

What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =

Comment: Unused arguments error without used arguments in GSVA?

Awards • All

Teacher to Gordon Smyth 52k

Scholar to James W. MacDonald 68k