Showing : GOfuncR • reset
1
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GOfuncR fails to build on Mac OS
GOfuncR
updated 14 months ago by ▴ 10 • written 19 months ago by ▴ 30
0
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835
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Gene enrichment analysis
analysis R GOfuncR
updated 22 months ago by ▴ 760 • written 22 months ago by • 0
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1
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947
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I want to convert the go enrichment result to a data frame (tidy data)with two column which one is the gene symbol and the other is go term. Any one…
GO.db GOfuncR GO GOSim goProfiles
updated 2.5 years ago by ▴ 780 • written 2.5 years ago by • 0
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question about the refined outputs from GOfuncR package
GOfuncR
3.5 years ago • updated 2.8 years ago capricygcapricyg ▴ 10
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Graphically Represent p-values from plot_annot_score in package GOfuncR
GOfuncR plot_anno_scores plot_stats
updated 6.5 years ago by • 0 • written 6.5 years ago by ▴ 40
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Answer: WGCNA by ATpoint ★ 4.8k
> I would like to ask whether it would make sense to first normalize the count data using DESeq2 and VST before performing WGCNA. This …
Answer: cannot download atena annotation for human by Robert Castelo ★ 3.4k
Hi, sorry for the delay in getting back to you, probably by now you found the solution yourself, but just in case you didn't or anybody els…
Answer: Comparison of results obtained from a subset of the data versus the complete dat by swbarnes2 ★ 1.4k
In general, using the entire dataset and then just comparing the subgroups you want within the whole dataset is preferable.
Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k
If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…
Answer: PhD scholar by ATpoint ★ 4.8k
Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…
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Answer: Origin of the labels for the SingleCellMultiModal dataset
Answer: PhD scholar
Answer: how to use `arrayWeightsQuick()`?
Answer: how to use `arrayWeightsQuick()`?
Having Trouble Using CNE12() and CNE21() in CNEr
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