Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
GDCPrepare
•
reset
0
votes
0
replies
1.1k
views
Error in GDCDownload and GDCPrepare for TCGA-PAAD Dataset
GDCPrepare
GDCDownload
2.4 years ago
Manav
• 0
0
votes
0
replies
1.7k
views
GDCprepare error in TCGAbiolinks
tcgabiolinks
gdcprepare
differential expression
5.3 years ago
fawazfebin
▴ 60
4
votes
5
replies
3.0k
views
GDCprepare - error
TCGABiolinks
GDCprepare
5.5 years ago
vm
▴ 30
2
votes
2
replies
1.8k
views
TCGAbiolinks GDCprepare error
TCGAbiolinks
GDCprepare
error
updated 5.5 years ago by
Tiago C. Silva
▴ 270 • written 5.5 years ago by
Talip
▴ 10
1
vote
5
replies
1.9k
views
Issue with TCGAbiolinks package.
TCGA
GDCprepare
6.0 years ago
salvocomplicazioni1
• 0
0
votes
2
replies
2.2k
views
GDCprepare stop working for some unknown reason
tcgabiolinks
gdcprepare
updated 6.1 years ago by
James W. MacDonald
67k • written 6.1 years ago by
ansari.sarabio
• 0
0
votes
0
replies
1.0k
views
Reasoning for illegal operation
tcgabiolinks
illegaloperation
gdcprepare
7.1 years ago
lisa8191
• 0
0
votes
1
reply
1.9k
views
How to get treatment information with TCGAbiolinks?
gdcprepare
tcgabiolinks
treatment_type
R
data extraction
updated 7.6 years ago by
Dario Strbenac
★ 1.5k • written 7.6 years ago by
newbie
• 0
0
votes
3
replies
1.5k
views
TCGA controlled data
R
tcgabiolinks
gdcprepare
7.7 years ago
ugandhar.ch1
• 0
0
votes
2
replies
4.1k
views
Extract gene expression values from GDCprepare object
tcgabiolinks
tcga
tcgadownload
gdcprepare
gdc
updated 7.8 years ago by
Tiago Chedraoui Silva
▴ 260 • written 8.0 years ago by
enigmargs
• 0
0
votes
8
replies
3.0k
views
TCGAbiolinks GDCprepare fails to connect to Biomart web server
tcgabiolinks
gdcprepare
8.3 years ago
sabarinath.chandrasekharan
▴ 10
0
votes
1
reply
1.4k
views
Error during GDCprepare
tcgabiolinks
gdcprepare
updated 8.4 years ago by
Tiago C. Silva
▴ 270 • written 8.4 years ago by
Mariana Boroni
▴ 10
12 results • Page
1 of 1
Recent ...
Replies
Answer: How to sort negative log2FC or FC in RNAseq for GSEA?
by
ATpoint
★ 4.6k
GSEA asks whether there are general shifts in gene expression towards certain terms. Hence, you would not split your results tables but ord…
Comment: EdgeR Biological CVs
by
James
• 0
Cheers. I presume question (1) would be answered by using a prior G0 of 0? For question (2), I was expecting a biological reason (noisier …
Comment: EdgeR Biological CVs
by
James
• 0
Thank you Gordon and Joseph
Comment: EdgeR Biological CVs
by
Joseph
• 0
I believe the published study provides answers to your questions. Yunshun Chen and Pedro Baldoni's recent papers on edgeR may also be of in…
Answer: EdgeR Biological CVs
by
Gordon Smyth
52k
I think your questions are answered by the published paper. You might also like to consult recent papers on edgeR by Yunshun Chen and Pedro…
Votes
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Answer: Limma Interaction Effect with Covariates
Awards
• All
Popular Question
to
Dario Strbenac
★ 1.5k
Popular Question
to
Gordon Smyth
52k
Popular Question
to
Bob
▴ 10
Popular Question
to
shepherl
4.1k
Scholar
to
James W. MacDonald
67k
Locations
• All
Germany,
11 minutes ago
India,
13 minutes ago
India,
17 minutes ago
UPF, Barcelona, Spain,
25 minutes ago
Belgium,
36 minutes ago
Traffic: 797 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6