Showing : GDCPrepare • reset
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Error in GDCDownload and GDCPrepare for TCGA-PAAD Dataset
GDCPrepare GDCDownload
2.5 years ago Manav • 0
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1.8k
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GDCprepare error in TCGAbiolinks
tcgabiolinks gdcprepare differential expression
5.4 years ago fawazfebin ▴ 60
4
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5
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3.1k
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GDCprepare - error
TCGABiolinks GDCprepare
5.7 years ago vm ▴ 30
2
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2
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1.9k
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TCGAbiolinks GDCprepare error
TCGAbiolinks GDCprepare error
updated 5.7 years ago by ▴ 270 • written 5.7 years ago by ▴ 10
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5
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Issue with TCGAbiolinks package.
TCGA GDCprepare
6.1 years ago salvocomplicazioni1 • 0
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2.3k
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GDCprepare stop working for some unknown reason
tcgabiolinks gdcprepare
updated 6.3 years ago by 68k • written 6.3 years ago by • 0
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Reasoning for illegal operation
tcgabiolinks illegaloperation gdcprepare
7.2 years ago lisa8191 • 0
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1
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2.0k
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How to get treatment information with TCGAbiolinks?
gdcprepare tcgabiolinks treatment_type R data extraction
updated 7.7 years ago by ★ 1.6k • written 7.7 years ago by • 0
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3
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1.6k
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TCGA controlled data
R tcgabiolinks gdcprepare
7.8 years ago ugandhar.ch1 • 0
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4.2k
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Extract gene expression values from GDCprepare object
tcgabiolinks tcga tcgadownload gdcprepare gdc
updated 8.0 years ago by ▴ 260 • written 8.1 years ago by • 0
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8
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3.1k
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TCGAbiolinks GDCprepare fails to connect to Biomart web server
tcgabiolinks gdcprepare
8.5 years ago • updated 8.4 years ago sabarinath.chandrasekharan ▴ 10
0
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1.4k
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Error during GDCprepare
tcgabiolinks gdcprepare
updated 8.5 years ago by ▴ 270 • written 8.5 years ago by ▴ 10
12 results • Page 1 of 1
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Comment: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by AB ▴ 110
Force=TRUE did the trick. Thank you.
Comment: www.stats.ox.ac.uk seems to be off, leading to errors/delays when installing pac by DENG • 0
[https://github.com/djunsheep/CRANextra/blob/main/README.md][1] add the following to the `.Rprofile` and `Rprofile.site` # fixing the…
Comment: Transcript ID Mismatch in riboWaltz Annotation Table by shepherl 4.1k
riboWalze is not a Bioconductor package and does not appear to be a Bioconductor function; the maintainer is not guaranteed to be on this …
Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by shepherl 4.1k
What is your `sessionInfo()`? I just tried locally and it works fine so there might have been a bad or interrupted download when initially…
Comment: error in ChAMP loading file by shocked.tick.zyet • 0
Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…
Votes
Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf
Answer: Differential expression of proteins using somascan data
Answer: Surprising behavior for DEXseq dispersion estimate plot?
Answer: Handle zero effective gene length when tximport RSEM results
Handle zero effective gene length when tximport RSEM results
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