Bioconductor FlowSom

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FlowSOM

written 7 months ago by Priyanka • 0

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771

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FlowSOM

updated 16 months ago by SamGG ▴ 360 • written 16 months ago by agus_rizzo • 0

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539

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FlowSOM

16 months ago agus_rizzo • 0

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1.2k

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FlowSOM

updated 17 months ago by SamGG ▴ 360 • written 17 months ago by agus_rizzo • 0

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800

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FlowSOM cytofWorkflow

updated 2.0 years ago by helucro ▴ 70 • written 2.0 years ago by Anirban • 0

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1.0k

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flowWorkspace CytoGLMM FlowSOM

3.4 years ago hbolouri • 0

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1.2k

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FlowSOM

3.5 years ago jakub.savara • 0

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FlowSOM

3.8 years ago ismail.ameran • 0

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2.2k

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FlowSOM

updated 4.4 years ago by sofie.vangassen ▴ 10 • written 4.4 years ago by Václav • 0

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1.7k

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Cytofast FlowSom CyTOF fcs files

4.5 years ago domenico.somma • 0

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1.4k

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flowcytometry flowSOM flowSET flowFrame

6.0 years ago fabrizio.benedetti.82 • 0

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1.7k

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flowsom consensusclusterplus

8.1 years ago Lukas Weber • 0

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1.4k

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flowcore flowsom

8.6 years ago jeremyeadler • 0

13 results • Page 1 of 1

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Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

Underpowerment and notable noise/variability, that's the answer.

Comment: DESeq - help with pair wise comparisons by ATpoint ★ 4.8k

It's exactly this, no? https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#group-specific-condition-effect…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

Sorry for the repetitive questions! I'm actually just trying to understand it better so that I can explain to the wet lab biologists in my …

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> Would you advice against running deseq separately for each comparison? You're reducing power even more. Look, since you appear a bit "de…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

Thank you for the quick reply. Rep 1 is lower than rep 2 in only one group (V_CD45), is this sufficient to affect the results even if I inc…

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Answer: Improving performance of edgeR and limma while adjusting for multiple confounder

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

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