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FlowSOM
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reset
0
votes
2
replies
442
views
FlowSOM library requires igraph but igraph does not install
FlowSOM
written 7 months ago by
Priyanka
• 0
0
votes
2
replies
772
views
FlowSOM error system.file()
FlowSOM
updated 16 months ago by
SamGG
▴ 360 • written 16 months ago by
agus_rizzo
• 0
0
votes
0
replies
542
views
Identifying populations within a FlowSOM tree
FlowSOM
17 months ago
agus_rizzo
• 0
1
vote
3
replies
1.2k
views
FlowSOM Error in flowCore::read.FCS
FlowSOM
updated 17 months ago by
SamGG
▴ 360 • written 17 months ago by
agus_rizzo
• 0
1
vote
1
reply
801
views
FlowSOM with unrelated channels
FlowSOM
cytofWorkflow
updated 2.0 years ago by
helucro
▴ 70 • written 2.0 years ago by
Anirban
• 0
0
votes
0
replies
1.0k
views
Job:
Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace
CytoGLMM
FlowSOM
3.4 years ago
hbolouri
• 0
0
votes
2
replies
1.2k
views
FlowSOM dependencies - cytoML and flowutils
FlowSOM
3.5 years ago
jakub.savara
• 0
0
votes
0
replies
1.2k
views
Help with FlowSOM
FlowSOM
3.8 years ago
ismail.ameran
• 0
1
vote
6
replies
2.2k
views
Running FlowSOM in R problem
FlowSOM
updated 4.4 years ago by
sofie.vangassen
▴ 10 • written 4.4 years ago by
Václav
• 0
0
votes
0
replies
1.7k
views
Error from FlowSom to Cytofast
Cytofast
FlowSom
CyTOF
fcs files
4.5 years ago
domenico.somma
• 0
0
votes
1
reply
1.4k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
6.0 years ago
fabrizio.benedetti.82
• 0
0
votes
0
replies
1.7k
views
FlowSOM and ConsensusClusterPlus: reproducibility issue
flowsom
consensusclusterplus
8.1 years ago
Lukas Weber
• 0
0
votes
1
reply
1.4k
views
multiple errors in flowSOM- with readinput and metaClustering_consensus
flowcore
flowsom
8.6 years ago
jeremyeadler
• 0
13 results • Page
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Answer: Model performance for spline modelling of RNA-seq timecourses in edgeR
by
Gordon Smyth
52k
I don't understand your question, because there is no difference between limma or glmFit or glmQLFit in terms of spline modeling or the tes…
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
by
Luca
• 0
Perhaps edgeR's upperquartile normalization handles this better, the MA looks a lot more centered at 0 ![enter image description here][1]…
Answer: DESeq2 - am I extracting results incorrectly?
by
James W. MacDonald
68k
If I assume that Followup gets converted to T3 and Treatment to LowSug somewhere along the line (and therefore GroupTreatment.Followup is G…
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
by
Luca
• 0
I noticed the dual populations as well, when using csaw this is controlled for. Regarding the DE profile, given this disease condition we e…
Answer: Origin of the labels for the SingleCellMultiModal dataset
by
ATpoint
★ 4.8k
If you check the underlying code a bit you find that there is a file with data sources: ```r modes_file <- system.file("extdata", "metadat…
Votes
Limma outputs different results for same sample?
Answer: Improving performance of edgeR and limma while adjusting for multiple confounder
Comment: DESeq - help with pair wise comparisons
Answer: Is random access by row index possible for an indexed VCF file?
Answer: Is random access by row index possible for an indexed VCF file?
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