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FlowSOM
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0
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2
replies
310
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FlowSOM library requires igraph but igraph does not install
FlowSOM
written 3 months ago by
Priyanka
• 0
0
votes
2
replies
614
views
FlowSOM error system.file()
FlowSOM
updated 12 months ago by
SamGG
▴ 360 • written 12 months ago by
agus_rizzo
• 0
0
votes
0
replies
462
views
Identifying populations within a FlowSOM tree
FlowSOM
12 months ago
agus_rizzo
• 0
1
vote
3
replies
949
views
FlowSOM Error in flowCore::read.FCS
FlowSOM
updated 12 months ago by
SamGG
▴ 360 • written 13 months ago by
agus_rizzo
• 0
1
vote
1
reply
686
views
FlowSOM with unrelated channels
FlowSOM
cytofWorkflow
updated 20 months ago by
helucro
▴ 70 • written 20 months ago by
Anirban
• 0
0
votes
0
replies
934
views
Job:
Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace
CytoGLMM
FlowSOM
3.0 years ago
hbolouri
• 0
0
votes
2
replies
1.1k
views
FlowSOM dependencies - cytoML and flowutils
FlowSOM
3.1 years ago
jakub.savara
• 0
0
votes
0
replies
1.1k
views
Help with FlowSOM
FlowSOM
3.4 years ago
ismail.ameran
• 0
1
vote
6
replies
2.0k
views
Running FlowSOM in R problem
FlowSOM
updated 4.1 years ago by
sofie.vangassen
▴ 10 • written 4.1 years ago by
Václav
• 0
0
votes
0
replies
1.6k
views
Error from FlowSom to Cytofast
Cytofast
FlowSom
CyTOF
fcs files
4.2 years ago
domenico.somma
• 0
0
votes
1
reply
1.3k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
5.6 years ago
fabrizio.benedetti.82
• 0
0
votes
0
replies
1.6k
views
FlowSOM and ConsensusClusterPlus: reproducibility issue
flowsom
consensusclusterplus
7.7 years ago
Lukas Weber
• 0
0
votes
1
reply
1.3k
views
multiple errors in flowSOM- with readinput and metaClustering_consensus
flowcore
flowsom
8.3 years ago
jeremyeadler
• 0
13 results • Page
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Answer: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data
by
Aaron Lun
★ 28k
You don't mention how your matrix data is being represented, but if it's a file-backed matrix (e.g., `HDF5Matrix` or one of its variants, b…
Comment: contrast matrix design for a continuous variable
by
dtzhu337
• 0
Thank you, Gordon. X is time splines for time point, and yes, it's needed. However, I was also thinking to incorporate time point with se…
Answer: contrast matrix design for a continuous variable
by
Gordon Smyth
52k
Yes, the design and contrasts are correct. Your analysis is also adjusted for covariates defined by X, which I assume is what you want to …
Comment: fail to use addPerROIQC in Rmd
by
liu.n
• 0
That's odd. So it can run successfully within markdown but would be failed when knitting?
Comment: fail to use addPerROIQC in Rmd
by
joseph.joonsang
• 0
> dim(spe) [1] 19962 425
Votes
Answer: contrast matrix design for a continuous variable
A: What's the difference between p.adjust and qvalue?
Answer: DESeq2- merging technical vs biological replicates
Comment: What type of counts data to import for performing Isoform analysis in edgeR
Answer: What type of counts data to import for performing Isoform analysis in edgeR
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