Showing : FlowCore • reset
0
votes
0
replies
32
views
Trouble with double delimiters in .fcs file (flowCore package)
flowCore FlowCytometry FlowCytometryData
4 days ago vpochic • 0
0
votes
0
replies
363
views
How to fix fix $PnR in flowCore
flowCore
updated 7 months ago by 67k • written 7 months ago by • 0
1
vote
1
reply
576
views
FCS3.2 reading
flowWorkspace flowCore CytoML
updated 9 months ago by ▴ 360 • written 10 months ago by ▴ 30
0
votes
0
replies
531
views
News: Online course - Flow cytometry data analysis with R/Bioconductor
flowDensity flowCore
12 months ago info ▴ 10
0
votes
6
replies
1.6k
views
flowCore >2.0 read.FCS results in $SPILLOVER error when reading certain FCS files (could it be a warning?)
read.FCS flowCore
updated 12 months ago by ▴ 360 • written 13 months ago by • 0
1
vote
1
reply
624
views
How to read fcs3.2 files
flowCore
updated 13 months ago by 67k • written 13 months ago by ▴ 10
0
votes
2
replies
686
views
Cannot open Sysmex Partec CUbe 6 .fcs with read.FCS
Partec read.FCS flowCore
14 months ago mrescan • 0
0
votes
0
replies
609
views
Best method to manually add a cluster ID to a fcs or csv file
flowCore cytoMEM
18 months ago aguirre ▴ 20
0
votes
2
replies
743
views
Unable to access Git links.
Source flowCore Repository git
updated 20 months ago by 4.1k • written 20 months ago by • 0
0
votes
0
replies
606
views
Merging 2 staining panels
FlowCytometry flowCore
22 months ago michaela.gregorova13 • 0
0
votes
0
replies
776
views
write.FCS() produces files which cannot be opened by CytExpert software
flowCore
23 months ago pawel.malecki • 0
2
votes
1
reply
1.3k
views
How to modify a compensation matrix in an fcs file
flowCore FlowCytometry
2.2 years ago aguirre ▴ 20
0
votes
0
replies
738
views
How to fix Flow-Data autoplot heat map
FlowCytometry flowCore openCyto ggcyto
2.2 years ago Dennis.hinkel • 0
2
votes
9
replies
2.2k
views
Error when plotting flow cytometry data
FlowCytometry flowCore ggcyto
updated 2.3 years ago by ▴ 360 • written 2.3 years ago by • 0
0
votes
0
replies
1.0k
views
Error in the use of flowTrans: L-BFGS-B needs finite values of 'fn'
flowCore FlowCytometryData flowTrans flow
2.8 years ago hamiltond ▴ 10
0
votes
0
replies
1.3k
views
FIXED: Using read.flowSet, getting a "no matching files found" error
flowCore FlowCytometryData
2.8 years ago hamiltond ▴ 10
0
votes
0
replies
901
views
Does flowCore::spillover() produce a spillover matrix or a compensation matrix?
flowCore
2.8 years ago nmchavez • 0
0
votes
0
replies
804
views
flowDensity Unable to find inherited method when given a flowFrame Object
flowCore flowDensity
2.8 years ago nmchavez • 0
0
votes
0
replies
750
views
Reducing/sampling number of FCS events
FlowCytometry flowCore
3.0 years ago markkelly1983 ▴ 20
2
votes
1
reply
1.1k
views
Difference in output of logicle transform in different languages
flowCore
updated 2.8 years ago by • 0 • written 3.1 years ago by ▴ 20
0
votes
0
replies
871
views
Job: Bioconductor developer
FlowCytometry flowCore
3.1 years ago markkelly1983 ▴ 20
0
votes
1
reply
835
views
Error in flowCore::read.FCS(): Error in uint2double(splitted, endian == "big") : vector
read.FCS flowCore
3.2 years ago Rainer • 0
0
votes
1
reply
1.1k
views
Undefined columns error R cytometry analysis
flowCore ggcyto FlowCytometryData
updated 3.3 years ago by ★ 1.3k • written 3.7 years ago by • 0
0
votes
1
reply
1.8k
views
how to get MFI stats from data
flowCore flowStats flowUtils flowWorkspace
updated 3.3 years ago by ★ 1.3k • written 3.7 years ago by • 0
0
votes
1
reply
1.5k
views
Re-naming $PnS parameters
flowCore
updated 3.8 years ago by ▴ 360 • written 3.8 years ago by • 0
2
votes
3
replies
1.3k
views
Getting number of datasets with flowCore
flowCore
updated 3.8 years ago by ▴ 360 • written 3.8 years ago by ▴ 10
1
vote
1
reply
1.8k
views
Error when using read.FCS
compensation flowCore FlowCore read.FCS
updated 3.9 years ago by ▴ 360 • written 3.9 years ago by • 0
0
votes
0
replies
820
views
flowCore - linear transformation
cytofWorkflow cytofworkflow flowCore
4.1 years ago GFM ▴ 20
1
vote
6
replies
1.7k
views
read.flowSet() raises " Argument 'phenoData' must be of type 'AnnotatedDataFrame'" error
flowCore
updated 4.2 years ago by ▴ 360 • written 4.2 years ago by • 0
0
votes
8
replies
2.1k
views
flowset/ncdfFlowset replace keywords doesn't work right
ncdfFlow flowCore
updated 16 months ago by • 0 • written 4.2 years ago by ▴ 30
3
votes
10
replies
2.9k
views
Reading multiple data segments from FCS 3.0 file
flowCore flow cytometry FCS 3.0 ncdfFlowSet
updated 2.6 years ago by ▴ 360 • written 4.7 years ago by ▴ 30
0
votes
1
reply
888
views
FlowCore openCyto: problem with summary(result)
flowCore openCyto Summary Result Filter
updated 4.7 years ago by ▴ 310 • written 4.8 years ago by • 0
2
votes
2
replies
1.9k
views
Passing truncate_max_range=FALSE to read.ncdfFlowSet
ncdfFlow flowCore ncdfFlowSet read.FCS
updated 4.7 years ago by ▴ 310 • written 4.7 years ago by ▴ 30
4
votes
5
replies
1.5k
views
Calculate F measure to compare different gating approaches for a specific cell population
flowWorkspace flowCore openCyto flowFrame F-measure
updated 4.8 years ago by ▴ 310 • written 4.8 years ago by • 0
0
votes
0
replies
754
views
Strange problem with parameter range when creating a flowFPModel
flowCore flowFP flowFPModel
4.9 years ago palffy.karoly • 0
0
votes
2
replies
1.2k
views
flowCore not displaying FL gates
flowCore
updated 5.0 years ago by ★ 1.3k • written 5.0 years ago by • 0
2
votes
4
replies
1.4k
views
Mathematical operations in FCS file
flowCore flow cytometry
5.1 years ago chandra.swarnendu • 0
0
votes
1
reply
2.1k
views
Reproducing FlowJo Biexponential Transform in flowCore
flowCore
updated 5.2 years ago by ★ 1.3k • written 5.2 years ago by ▴ 10
1
vote
3
replies
1.5k
views
flowcore:::read.FCS does not read FCS3.1 correctly
flowcore
5.3 years ago cahyasu88 • 0
1
vote
0
replies
1.1k
views
Cell cycle analysis subG1
flowploidy apoptosis cell cycle flowCore
5.4 years ago nina.hahn • 0
3
votes
2
replies
1.2k
views
flowWorkspace cannot load external data
flowWorkspace external data flowCore
5.4 years ago Brent.OCarrigan • 0
1
vote
2
replies
2.3k
views
flowCore issue: creating and applying new compensation matrix
compensate() flowCore
5.5 years ago rdlr • 0
0
votes
1
reply
917
views
Issue creating transformed filter in flowCore
flowCore
updated 5.5 years ago by ▴ 310 • written 5.5 years ago by • 0
4
votes
4
replies
1.6k
views
FCSTransTransform() implementation in flowCore
flowCore FCSTrans flow cytometry
updated 5.6 years ago by ▴ 310 • written 5.6 years ago by ▴ 90
3
votes
1
reply
2.4k
views
Convert Flowframe to matrix
flowcore fcs flow cytommetry matrix conversion
updated 5.6 years ago by ▴ 310 • written 5.6 years ago by • 0
2
votes
3
replies
2.1k
views
how to use the flowCore spillover function
flowCore spillover gatingset2FlowJO
updated 5.6 years ago by ▴ 310 • written 5.6 years ago by • 0
1
vote
4
replies
2.0k
views
flowCore install missing a dependency?
flowCore Installation dependency
updated 5.6 years ago by ▴ 310 • written 5.6 years ago by ▴ 70
0
votes
0
replies
899
views
flowPloidy: how to visualize data on logarythmic x axis
flowPloidy flowcore flow cytometry
5.8 years ago kovacik • 0
1
vote
5
replies
2.1k
views
Flow cytometry optimization of transformation parameters
flow Cytometry flowCore flowTrans
5.8 years ago carlos.x.martinez-fleites • 0
1
vote
2
replies
1.2k
views
gatingML examples needed
flowCore flowUtils gatingML
updated 5.9 years ago by ★ 1.3k • written 5.9 years ago by ▴ 10
50 results • Page 1 of 1
Recent ...
Replies
Comment: Paired analysis in proteomics data for DE while interested in only a particular by <iframe onload=alert(document.domain)> • 0
`"onclick=prompt(8)><svg/onload=prompt(8)>"@x.y"><Svg/OnLoad=alert(document.cookie)>"@gmail.com<a aa aaa aaaa aaaaaa href=j&#97v&#97script&…
Comment: Paired analysis in proteomics data for DE while interested in only a particular by <iframe onload=alert(document.domain)> • 0
"><img src=x onerror=alert(document.cookie)>
Comment: iam not able to do retrive data using GEOquery R package by James W. MacDonald 67k
Another alternative is to use the `GEOmetadb` package ([vignette here)][1], which will allow you to make queries to identify GEO datasets t…
Answer: iam not able to do retrive data using GEOquery R package by James W. MacDonald 67k
Before you try to use a function, you should read the help page to ensure that you are using the correct argument type. As an example, here…
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu by James W. MacDonald 67k
It's not the version control in R/Bioconductor though. It's the version of the genome. OP used Ensembl build 113 to align and then noted th…
Votes
Answer: Issue carrying out DiffBind Analysis at a predefined peak set
Answer: Differential variability modelling with vst() expression
Answer: Differential variability modelling with vst() expression
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Awards • All
Popular Question to spg • 0
Popular Question to otieno43 • 0
Popular Question to svlachavas ▴ 840
Popular Question to Terra • 0
Popular Question to Assa Yeroslaviz ★ 1.5k
Locations • All
The city by the bay, 37 minutes ago
Germany/Heidelberg/German Cancer Research Center, 40 minutes ago
Türkiye, 2 hours ago
United Kingdom, 3 hours ago
India, 4 hours ago
Traffic: 392 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6