Bioconductor Exon

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DEXSeq exon_definition exon

updated 21 months ago by Alejandro Reyes ★ 1.9k • written 21 months ago by zhangpeng1202 • 0

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579

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exon AnnotationHubData

23 months ago mahima.g • 0

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1.2k

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splicing Exon featureCounts subread DEXSeq

2.9 years ago • updated 2.8 years ago NIK • 0

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924

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DEXSeq exon

updated 3.0 years ago by Alejandro Reyes ★ 1.9k • written 3.0 years ago by jochen • 0

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DEXSeq exon memory dispersions estimateDispersions

4.9 years ago andreismolnikov00 • 0

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3.2k

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rsubread featurecounts exon mRNAseq

updated 7.8 years ago by Wei Shi ★ 3.6k • written 7.8 years ago by inah ▴ 10

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rnaseq exon quasr

updated 10.3 years ago by Steve Lianoglou ★ 13k • written 10.3 years ago by sven.schuierer • 0

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Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30

I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

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Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

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