Bioconductor EpicV2

Showing : EpicV2 • reset

votes

replies

912

views

EpicV2 ChAMPdata

updated 10 days ago by icecreamlover • 0 • written 5 weeks ago by nurkenber • 0

vote

replies

2.9k

views

ChAMP EPICv2

updated 29 days ago by Ricky • 0 • written 16 months ago by medha.suman • 0

votes

replies

141

views

EpicV2 DMRcate

5 weeks ago kitzhu • 0

vote

replies

867

views

sesame EPICv2manifest epicv2

4 months ago luca.s ▴ 50

votes

replies

525

views

sesameData EPICv2 EPICv1

updated 4 weeks ago by zhouwanding ▴ 20 • written 5 months ago by archibold.mposhi • 0

votes

replies

752

views

limma DMRcate MethylationArray EPICV2

updated 5 months ago by Gordon Smyth 51k • written 6 months ago by Kim • 0

vote

replies

1.4k

views

DNAMethylation GO MethylationArray missMethyl EPICv2

8 months ago • updated 8 weeks ago s.malik • 0

votes

replies

1.3k

views

DNAMethylation EPICv2 IlluminaHumanMethylationEPICmanifest

updated 8 months ago by James W. MacDonald 67k • written 9 months ago by rae.alshammari ▴ 10

votes

replies

2.0k

views

ChAMP EPICv2

updated 9 days ago by icecreamlover • 0 • written 10 months ago by ChunkyJones • 0

votes

replies

1.4k

views

sesame IlluminaHumanMethylationEPICv2anno.20a1.hg38 methylationEPICv2.0 EpicV2

updated 8 months ago by aldea85 • 0 • written 12 months ago by Courtney • 0

votes

replies

2.5k

views

minfiDataEPIC EpicV2

updated 14 months ago by Zuguang Gu ▴ 290 • written 15 months ago by Izabela.ams • 0

11 results • Page 1 of 1

Recent ...

Replies

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0

thank you for your advice, I posted separate post.

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by Robert Castelo ★ 3.4k

Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…

Answer: DESeq2 rerun returns different results by ATpoint ★ 4.5k

DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…

Answer: [How to construct a model.matrix ] by Gordon Smyth 51k

> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0

Hi Robert, Thank you for the explanation, But I am still little bit confused, Is the annotation package (TxDb.Hsapiens.UCSC.hg38.knownGene)…

Votes

C: DESeq2 baseMean values for each sample

Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta

A: Some questions for remove batch effect by using mnnCorrect

A: Recommendations for combining multiple 10x runs into one SingleCellExperiment

Awards • All