Showing : EISA • reset
3
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4
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3.5k
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Saving and retrieving TxDB object
makeTxDBFromGFF EISA
updated 4.5 years ago by 68k • written 4.5 years ago by • 0
0
votes
7
replies
2.6k
views
Bioconductor 2.6 is released
Sequencing Microarray Visualization Infrastructure PROcess beadarray keggorthology eisa
updated 8.5 years ago by • 0 • written 14.8 years ago by ★ 1.6k
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0
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1.1k
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Remove coexpressed gene pair modules using eisa package
isa2 eisa microarray affymetrix
9.7 years ago dhwani.dholakia • 0
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0
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1.2k
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Biclustering approach to make transcription modules for rna seq data
rnaseq bicluster trancription modules eisa isa
9.8 years ago dhwani.dholakia • 0
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1.1k
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what is the input file to isa2 package
isa2 eisa
9.8 years ago dhwani.dholakia • 0
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1.6k
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OpenCyto
Cancer eisa openCyto Cancer eisa openCyto
10.6 years ago Jiang, Mike ★ 1.3k
6 results • Page 1 of 1
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Comment: accounting for vs. removing batch effects with DESeq2 in RNAseq analysis by Blair • 0
@[Sprunki][1] wrote: Please read the vignette and think about adhering to the author's best practice, which discusses batch impacts. [1…
Comment: error in ChAMP loading file by 81becky • 0
hi Giulia, it sounds like you're facing a frustating issue with your chAMP import. One common suggestion is to double-check your CSV fomat…
Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k
From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0
Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0
Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
Votes
Answer: Efficiently working with HDF5-backed SingleCellExperiments
Efficiently working with HDF5-backed SingleCellExperiments
A: Effect of lfcThreshold on p-value in DESeq2
Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?
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