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Replies
Comment: DiffBind; Error: No sites have activity greater than filter value
by
etiennedanis
•
0
Same issue here as well.
This is very weird because I never had this issue before.
I started observing this issue with a new ATAC-seq da…
Comment: GSEA preranked analysis downstream of DEseq2
by
Ajay
•
0
`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1]
[1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/
Comment: error in ChAMP loading file
by
janwilseo
•
0
Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)
Answer: CluserProfiler message "No gene can be mapped"
by
James W. MacDonald
68k
Two things. First, the order of your term2gene is backwards (should be term and then gene, like the name), and by default `enricher` adjust…
Comment: Controlling for batch and estrus cycle using DESeq2 in RNA-seq analysis
by
donnycrimson
•
0
One potential workaround might be to adjust for these factors using a combination of design matrices perhaps including batch as a covariate…
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