updated 3 months ago by
Lluís Revilla Sancho
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Answer: SingleCellExperiment convenience function for metadata+expression?
by
Peter Hickey
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Hi Sarah,
`scuttle::makePerCellDF()` / `scuttle::makePerFeatureDF()` and `scater::ggcells()` / `scater::ggfeatures()`, which build upon th…
Comment: How to sort negative log2FC or FC in RNAseq for GSEA?
by
QN
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10
Thank you ATpoint for your response!
In the result of GSEA, like you indicated, there will be gene sets that have positive NES and gene se…
Answer: How to sort negative log2FC or FC in RNAseq for GSEA?
by
ATpoint
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4.6k
GSEA asks whether there are general shifts in gene expression towards certain terms. Hence, you would not split your results tables but ord…
Comment: EdgeR Biological CVs
by
James
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0
Thank you Gordon and Joseph. I presume question (1) would be answered by using a prior G0 of 0?
For question (2), I was expecting a biolog…
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