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News: News: Bioinformatics Summer School - July 2020 - UCLouvain (Belgium)
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5.0 years ago Laurent Gatto 1.6k
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News: LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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7.0 years ago mnchoi67 ▴ 40
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News: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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7.0 years ago mnchoi67 ▴ 40
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BioC happening in 2018?
BioC 2018 Course
7.4 years ago s.munster ▴ 40
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News: Advanced R programming course - EMBL Heidelberg, 3-4 April 2017
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8.0 years ago • updated 7.8 years ago Laurent Gatto 1.6k
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News: Workshop: microRNA Analysis Using Next-Generation Sequencing - From microRNA profiling and prediction to extensive downstream analyses
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8.6 years ago adele.feuerstein • 0
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News: Course: Analysis of RNA-seq and ChIP-seq data, March 29th - April 1st, Oeiras, Portugal
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8.9 years ago Mark Dunning ★ 1.1k
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News: Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
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8.9 years ago Martin Morgan 25k
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News: Looking to attend to a Bioconductor course for biologists in Europe
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updated 9.7 years ago by ▴ 370 • written 9.7 years ago by ▴ 20
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News: 4 days left to register for a short course on computational proteomics
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9.9 years ago Olga Vitek ▴ 40
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News: Course Announcement: Use R / Bioconductor for Sequence Analysis (Intermediate Course)
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9.9 years ago Martin Morgan 25k
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News: An introductory course to RNA-seq 17-19 March 2015
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9.9 years ago rcaloger ▴ 500
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News: Course announcement: CSAMA 2015 (13th ed.) Statistics and Computing in Genome Data Science
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10.0 years ago Wolfgang Huber ★ 13k
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News: Advanced Course: R programming and development 15-16. January 2015 (Thursday-Friday), EMBL Heidelberg
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10.3 years ago • updated 10.2 years ago Wolfgang Huber ★ 13k
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Comment: How to sort negative log2FC or FC in RNAseq for GSEA? by Quang NN ▴ 10
Thank you so much for taking time to provide this clarification!
Comment: How can I generate a heatmap and clustering of differentially expressed genes in by Renuka • 0
Thanks Kelvin i had same doubt .Do i need to do log2 (FPKMcounts) for this
Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by georgeyu703 • 0
Michael, Thank you very much!
Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by Michael Love 43k
Yes, with the knowledge that, it is expected to be underpowered.
Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by georgeyu703 • 0
Thank you, Michael. How? Could you provide more details? Can I just do it as usual, I mean to include batch in the model?
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Answer: SingleCellExperiment convenience function for metadata+expression?
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Answer: EdgeR Biological CVs
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
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