Bioconductor Clariom

Showing : Clariom • reset

votes

replies

866

views

Clariom Align MicroarrayData Alignment Microarray

23 months ago agamemnon • 0

vote

replies

1.5k

views

clariom oligo affycoretools pd.hugene.2.0.st

updated 5.9 years ago by James W. MacDonald 67k • written 5.9 years ago by svlachavas ▴ 840

vote

replies

1.0k

views

clariom pd.clariom.d.human

updated 6.2 years ago by James W. MacDonald 67k • written 6.2 years ago by AliStair Rust • 0

vote

1.2k

views

Rna degradation Clariom

updated 6.8 years ago by James W. MacDonald 67k • written 6.8 years ago by kritikamish99 ▴ 10

votes

replies

2.6k

views

affycoretools clariom

updated 7.4 years ago by James W. MacDonald 67k • written 7.4 years ago by willj ▴ 30

votes

replies

1.2k

views

oligo microarray clariom

updated 7.5 years ago by James W. MacDonald 67k • written 7.5 years ago by kmvaldez2 • 0

votes

replies

921

views

clariom genefu

7.6 years ago info • 0

7 results • Page 1 of 1

Recent ...

Replies

Comment: How to sort negative log2FC or FC in RNAseq for GSEA? by Quang NN ▴ 10

Thank you so much for taking time to provide this clarification!

Comment: How can I generate a heatmap and clustering of differentially expressed genes in by Renuka • 0

Thanks Kelvin i had same doubt .Do i need to do log2 (FPKMcounts) for this

Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by georgeyu703 • 0

Michael, Thank you very much!

Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by Michael Love 43k

Yes, with the knowledge that, it is expected to be underpowered.

Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by georgeyu703 • 0

Thank you, Michael. How? Could you provide more details? Can I just do it as usual, I mean to include batch in the model?

Votes

Answer: SingleCellExperiment convenience function for metadata+expression?

How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.

Answer: EdgeR Biological CVs

Answer: Error in download.file for TCGAutils::symbolsToRanges

Awards • All