Bioconductor ChipQCReport

Showing : ChipQCReport • reset

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ChipQCReport

updated 21 months ago by Okan • 0 • written 23 months ago by stacy.genovese • 0

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chipqc chipqcreport

6.2 years ago molly_the_minotaur ▴ 30

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ChipQC chipqcreport

6.2 years ago tapio.envall • 0

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chipqc chipqcreport

7.2 years ago • updated 7.1 years ago jared.andrews07 ▴ 30

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chipqc chipqcreport

updated 7.4 years ago by Thomas Carroll ▴ 420 • written 7.4 years ago by Roger • 0

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chipqc diffbind chipqcreport

updated 7.4 years ago by Thomas Carroll ▴ 420 • written 7.4 years ago by Coby Viner ▴ 50

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ChIPQC ChIPQCreport

updated 7.4 years ago by Thomas Carroll ▴ 420 • written 7.4 years ago by ZheFrench ▴ 60

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1.5k

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ChIPQC ChIPQCreport

updated 7.4 years ago by Thomas Carroll ▴ 420 • written 7.4 years ago by ZheFrench ▴ 60

8 results • Page 1 of 1

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Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column by GV Yoshikawa • 0

Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…

Answer: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k

> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…

Comment: Problem at champ.load by icecreamlover • 0

Hello! Were you able to figure this out? I am running into the same error!

Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0

Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

Awards • All

Teacher to Gordon Smyth 51k

Popular Question to Guido Hooiveld ★ 4.1k