Showing : ChipDb • reset
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AnnotationDbi Error: PROSITE is defunct.
ChipDb AnnotationDbi Annotation
20 months ago • updated 19 months ago ahiser • 0
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How to handle multiple assay versions in a ChipDb annotation package
ChipDb AnnotationDbi AnnotationForge
updated 22 months ago by 67k • written 22 months ago by • 0
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ChIP seeker annotation error
DiffBind chipseq ChIPseeker ChipDb annotation
4.0 years ago • updated 3.8 years ago Mar Mar ▴ 20
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4
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hugene10sttranscriptclusterACCNUM has no mappings
Annotation GO ChipDb probe
updated 10.2 years ago by ▴ 20 • written 10.2 years ago by ★ 7.2k
4 results • Page 1 of 1
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Comment: Identical samples after deseq2 batch effect removal by Michael Love 42k
Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…
Comment: Identifying potentially associated gene set to drug response using GSVA by Kent • 0
Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification by James W. MacDonald 67k
You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…
Answer: HilBertVis install error by James W. MacDonald 67k
It appears you have compiler flags set that preclude you from compiling (-Werror=format-security). If I install `HilbertVis` on my work box…
Comment: Identical samples after deseq2 batch effect removal by maripane • 0
Thanks Michael for quick reply. Actually, I also questioned this but later i saw this issue happens within another cluster and different c…
Votes
A: TopGO: How to retrieve the gene list related to a GO ID ?
A: Error in DESeqDataSet : some values in assay are not integers
A: correcting the batch effects in Limma and SVA
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
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