Bioconductor Celegans

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710

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Celegans DESeq2 dds Errorinseq_len(length(idx)-1)

updated 2.5 years ago by James W. MacDonald 68k • written 2.5 years ago by Enzo.Scifo • 0

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1.3k

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BSgenome Celegans

updated 3.0 years ago by Hervé Pagès 16k • written 3.0 years ago by Tsung-Han • 0

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2.1k

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Gviz celegans

updated 7.3 years ago by Robert Ivanek ▴ 750 • written 7.3 years ago by alex.gos90 ▴ 10

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1.9k

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biomaRt bioconductor celegans annotation

updated 7.3 years ago by Mike Smith ★ 6.6k • written 7.3 years ago by clarisbaby • 0

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952

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celegans affy convert celegans affy convert

updated 14.7 years ago by Marc Carlson ★ 7.2k • written 14.7 years ago by Julie Zhu ★ 4.3k

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1.2k

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Transcription GO celegans BSgenome Biostrings BSgenome IRanges Transcription GO celegans

updated 15.2 years ago by Sean Davis 21k • written 15.2 years ago by Paul Shannon ★ 1.1k

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1.1k

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celegans Biostrings celegans Biostrings

updated 16.4 years ago by Hervé Pagès 16k • written 16.4 years ago by Elizabeth Purdom ▴ 210

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1.1k

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celegans celegans

18.1 years ago Gordon Smyth 52k

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861

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Microarray Cancer celegans drosgenome1 affy Microarray Cancer celegans drosgenome1 affy

21.6 years ago James W. MacDonald 68k

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Answer: Design formula for circadian time-course data for vst() function by ATpoint ★ 4.8k

This was asked before: https://support.bioconductor.org/p/9148734/#9148812 Take-home message is that influence is minor, as you see your…

Comment: Filtering after DESeq by caroline.zanchi • 0

... I did it. It does filter out quite a bit of genes : ``` keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…

Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Comment: Feature Counts - potential bug with outfile.jcounts by Tom • 0

[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…

Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

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