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CRISPR
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Job:
Research Scientists/Postdoctoral Candidates/Computational Biologists and Programmers excited about computational challenges in modeling CRISPR genome…
CRISPR
SingleCell
Genomics
3.4 years ago
lpinello
• 0
0
votes
2
replies
1.8k
views
Using edgeR to analyze Cripsr/Cas9 Screening data
edger
processamplicons
sgrna
crispr
updated 2.0 years ago by
hyejo
• 0 • written 7.0 years ago by
Assa Yeroslaviz
★ 1.5k
2
votes
3
replies
1.3k
views
Independent filtering of NGS data
independentfiltering
DESeq2
CRISPR
4.1 years ago
Rubén
• 0
6
votes
14
replies
2.6k
views
gRNAefficacy calculations in CRISPRseek
crisprseek
crispr
gRNAefficacy
grna
updated 4.5 years ago by
Julie Zhu
★ 4.3k • written 4.5 years ago by
Dawid G. Nowak
▴ 40
1
vote
0
replies
1.2k
views
Job:
Postdoc/Bioinformatician Research Fellow @ Harvard Medical School/MGH/ Boston's Children Hospital
CRISPR
functional genomics
single cell
gene regulatory networks
Job
4.6 years ago
bauer
▴ 10
0
votes
0
replies
1.3k
views
Job:
Scientist 1, Bioinformatics (Research | Berkeley, CA | Full Time)
Bioinformatics
drug-discovery
RNA-seq
CRISPR
Job
4.6 years ago
yzhang
• 0
0
votes
19
replies
2.8k
views
Help with using CRISPRseeker
CRISPR
updated 5.5 years ago by
Julie Zhu
★ 4.3k • written 5.5 years ago by
sharvari gujja
▴ 40
0
votes
1
reply
1.7k
views
EdgeR: run processAmplicons without barcodes
EdgeR
CRISPR
Barcode
processamplicons
updated 6.8 years ago by
sdalin
• 0 • written 8.0 years ago by
neggersjasper
• 0
0
votes
4
replies
2.6k
views
Adaptation of DESeq/edgeR model for CRISPR drop-out screen
crispr
edger
deseq
deseq2
updated 7.3 years ago by
Aaron Lun
★ 28k • written 7.3 years ago by
emanuelvgoncalves
• 0
0
votes
2
replies
1.5k
views
How to start CrispRVariants with fastq file starting point
R
crispr
fastq
8.3 years ago
kfburbach
• 0
0
votes
6
replies
2.2k
views
Manipulating random CRISPR sequences
r
crispr
updated 8.7 years ago by
mousheng xu
▴ 10 • written 9.3 years ago by
shane
• 0
1
vote
1
reply
1.6k
views
CRISPRseek R package: description of output fields that are unclear
crisprseek
R
CRISPR
sgRNA
updated 9.1 years ago by
Julie Zhu
★ 4.3k • written 9.1 years ago by
alexgraehl
▴ 20
2
votes
27
replies
4.8k
views
CRISPRseek package: be aware that as of Oct 2015, CRISPRseek works best for for regions < 200kb
crisprseek
sgrna
crispr
cas9
R
9.4 years ago • updated 9.3 years ago
alexgraehl
▴ 20
13 results • Page
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Answer: how many significant figures are there in DESeq2 output
by
ATpoint
★ 4.7k
I strongly recommend to not concern yourself with these sorts of marginal problems because you're entering a realm in which you're entirely…
Comment: Problem using locateVariants() from the VariantAnnotation package
by
Marco
• 0
Ok, I think I found the problem. By looking at the `locateVariants()` source code, I was able to pinpoint that the problems is when trying …
Comment: Conumee for EPIC and EPICv2 copy number
by
Adam
• 0
As described on the [github](https://github.com/hovestadtlab/conumee2) the way to do this is using array_type = c("EPIC", "EPICv2") This i…
Comment: graper 1.22 Build is Broken
by
shepherl
4.1k
This is not an appropriate place to report this. this is for usage questions. maintainers are notified automatically when it is failing on …
Comment: graper 1.22 Build is Broken
by
shepherl
4.1k
This post does not fit the theme of this forum.
Votes
A: Unbalanced experiment with multiple samples from each patient.
Unbalanced experiment with multiple samples from each patient.
Answer: Vertical line at A=0, nothing else, on MA plot
Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct
Answer: Group-specific condition effects with individuals nested: matrix is not full ra
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