Bioconductor CEL

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1.2k

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microarray affy cel drugmatrix

updated 4.4 years ago by Gordon Smyth 51k • written 4.4 years ago by peirinl • 0

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889

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Affymetrix CEL TXT

updated 4.9 years ago by James W. MacDonald 67k • written 4.9 years ago by pbachali ▴ 50

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1.3k

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gene expression gene expression data cel affy affymatrix

6.8 years ago torgeirous • 0

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1.5k

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oligo package Rstudio fatal error microarray CEL

7.0 years ago biostR ▴ 10

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2.1k

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oligo pd.hta.2.0 CEL R windows 7

7.2 years ago ladhikari • 0

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2.7k

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cel .cel fiels

7.7 years ago farahqureshi5 • 0

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1.5k

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cel affy

updated 8.1 years ago by James W. MacDonald 67k • written 8.1 years ago by libya.tahani • 0

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2.7k

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cel

8.7 years ago ranjita_duttaroy • 0

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2.2k

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affy cel

8.9 years ago thrabe • 0

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2.1k

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limma CEL GEO affydata expresiondataset

updated 9.0 years ago by Robert Castelo ★ 3.4k • written 9.0 years ago by libya.tahani • 0

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2.2k

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pca oligo cel

updated 9.4 years ago by Gabriel Nathan Kaufman, Mr ▴ 60 • written 9.4 years ago by angel.ruvalkba • 0

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2.6k

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CEL RAW geoquery readaffy

updated 10.0 years ago by Sean Davis 21k • written 10.0 years ago by PyPer ▴ 20

12 results • Page 1 of 1

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Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim by Ai • 0

Hi Gordon, Thank you so much for answering my question and confirming that this is expected! I will go ahead note this down. Sincerely, …

Answer: Annotation for EPICv2 by icecreamlover • 0

Hello, I am also working on analyzing my data from EPICv2 using ChAMP. I used this resource as a guide: https://github.com/YuanTian1991/ChA…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

And it doesn't matter if you're doing gene set analyses after, if the statistics are questionable to begin with.

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

If you're saying that (as an example) you have treated and control in both assay types, and you want to combine and make comparisons betwee…

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k

I have contacted NCBI, and meanwhile got an an answer. See below. It turns out that the official, HGNC-approved symbols are present in the…

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Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim

A: How does edgeR cpm function calculate log(CPM) values?

Answer: DecideTest vs topTAGs in edgeR

Comment: DESeq Input from Salmon + tximport/tximeta

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