Bioconductor BigWig

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votes

2.2k

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DESeq2 edgeR bigwig limma

2.5 years ago • updated 2.2 years ago Bogdan ▴ 670

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replies

2.5k

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bedgraph wiggleplotr bigwig wig

updated 2.6 years ago by complaintguide • 0 • written 2.6 years ago by Bogdan ▴ 670

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1.9k

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bigWig RNASeqData

3.2 years ago bas_work ▴ 30

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2.4k

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software error BigWig import windows

5.1 years ago • updated 5.0 years ago lsilva.m • 0

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2.4k

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wiggleplotr bigwig coverage ngs

updated 7.5 years ago by kaur.alasoo ▴ 30 • written 7.5 years ago by borgmichael • 0

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3.7k

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bigwig rtracklayer import granges grangeslist

updated 7.7 years ago by Michael Lawrence ★ 11k • written 7.7 years ago by Assa Yeroslaviz ★ 1.5k

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1.4k

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rtracklayer bigwig import

updated 8.4 years ago by Michael Lawrence ★ 11k • written 8.4 years ago by zx8754 ▴ 10

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1.7k

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bigwig rtracklayer export.bw

updated 8.5 years ago by Michael Lawrence ★ 11k • written 8.5 years ago by story.benjamin ▴ 20

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2.8k

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rtracklayer bigwig

updated 9.2 years ago by laurent.lacroix ▴ 30 • written 9.2 years ago by koneill ▴ 30

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1.4k

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rtracklayer BigWig

updated 9.4 years ago by Michael Lawrence ★ 11k • written 9.4 years ago by dborgesrmit • 0

10 results • Page 1 of 1

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Answer: Version conflict when pushing to scQTLtools devel branch by shepherl 4.1k

There is a Bioconductor release today. There were notifications on the bioc-devel mailing list https://stat.ethz.ch/pipermail/bioc-devel…

Comment: DiffBind can't find a DAR by Mengjun • 0

The details about this question: I have 4 samples with 2 conditions( ctrl_1, ctrl_2, ko_1, ko_2), i use these 4 samples as input. Here is …

Comment: DiffBind can't find a DAR by Mengjun • 0

Thank you very much for pointing out this shortcoming. I will improve it.

Comment: samtools loading in R by Charlie • 0

This is obviously a very late answer but I had a similar error: > sh: samtools: command not found > > sh: samtools: command not found > …

Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by njmcdirect • 0

https://www.www-njmcdirect.run/

Votes

Comment: GSVA ssGSEA vs. Broad implementation of ssGSEA

Answer: GSVA ssGSEA vs. Broad implementation of ssGSEA

GSVA ssGSEA vs. Broad implementation of ssGSEA

Comment: biomaRt server error, and mirrors do not help

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Popular Question to James W. MacDonald 68k