Bioconductor BSgenomeForge

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BSgenomeForge non-modelorganism unabletofindFTPdir

updated 5 months ago by Hervé Pagès 16k • written 5 months ago by Geetha • 0

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BSgenomeForge

19 months ago Bruno • 0

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2.5k

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BSgenomeForge BSgenome

updated 22 months ago by James W. MacDonald 68k • written 22 months ago by kyliecode • 0

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BSGenomeForge BSGenome

updated 4.1 years ago by Hervé Pagès 16k • written 4.1 years ago by sieminsk • 0

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2.0k

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cleanUpdTSeq BSgenome BSgenomeForge

updated 6.2 years ago by Julie Zhu ★ 4.3k • written 6.2 years ago by danielle.bilodeau • 0

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BSgenomeForge

8.6 years ago • updated 8.5 years ago Vijay Lakhujani • 0

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Answer: Design formula for circadian time-course data for vst() function by ATpoint ★ 4.8k

This was asked before: https://support.bioconductor.org/p/9148734/#9148812 Take-home message is that influence is minor, as you see your…

Comment: Filtering after DESeq by caroline.zanchi • 0

... I did it. It does filter out quite a bit of genes : ``` keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…

Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Comment: Feature Counts - potential bug with outfile.jcounts by Tom • 0

[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…

Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

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