Bioconductor BSgenome forge

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bsgenome forge twobits_export bioconductor

5.3 years ago bioinagesh • 0

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bsgenome forge TwoBits_export

updated 7.2 years ago by Hervé Pagès 16k • written 7.2 years ago by stu111538 • 0

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bsgenome bsgenome forge

7.8 years ago • updated 7.4 years ago jodiera • 0

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bsgenome forge

8.4 years ago pj dias ▴ 60

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crisprseek grna searching bsgenome forge offtarget analysis

updated 8.5 years ago by Hervé Pagès 16k • written 8.5 years ago by rajewski23 • 0

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BSgenome forge 2bit bsgnome forge 2bit file

updated 9.7 years ago by Hervé Pagès 16k • written 9.7 years ago by mbk0asis • 0

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bsgenome forge bovine

updated 9.7 years ago by Hervé Pagès 16k • written 9.7 years ago by mbk0asis • 0

7 results • Page 1 of 1

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Comment: makeContrastsDream for Interaction by abadgerw • 0

Thank you! I will try this out.

Comment: Merge Replicates vs Mixed Model by abadgerw • 0

Thanks, @gabrielhoffman The data is actually proteomics so it is intensity data which is why I did not use voom but rather ran ebayes wi…

Comment: ANOVA like approach of edgeR by Gordon Smyth 52k

To identify common upregulated or downregulated genes, you would need to test for media condition contrasts for each cell type separately, …

Comment: DESeq2 sizefactors counfounded with biological treatment by Anna • 0

Hi James, Apologies (re: posting in the wrong place). Thank you so much for your response, that was exactly the help I needed. Best, A…

Comment: ANOVA like approach of edgeR by Talip ▴ 10

I am comparing the expression patterns of different tissue cell lines (CellType) under five distinct media conditions (Status). Since the c…

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Comment: makeContrastsDream for Interaction

Answer: Limma- Print-tip loess normalisation-printer layout information does not match M

Comment: Limma- Print-tip loess normalisation-printer layout information does not match M

Answer: ANOVA like approach of edgeR

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Popular Question to Marek Gierlinski ▴ 30

Scholar to Gordon Smyth 52k

Popular Question to mohammedtoufiq91 ▴ 10

Popular Question to Hans-Ulrich Klein ▴ 330