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Abarray
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ABarray process error for ABI Human Genome Survey V2 data set
Abarray
error
ABI Human Genome Survey V2
7.1 years ago
judemtaylor
• 0
0
votes
1
reply
1.3k
views
AB Rat Genome Survey Microarray
probe
ABarray
probe
ABarray
13.1 years ago
Iain Gallagher
▴ 930
0
votes
1
reply
3.2k
views
2 way anova in Bioconductor
Microarray
GO
genefilter
limma
GeneSpring
ABarray
preprocessCore
arrayQualityMetrics
BRAIN
updated 13.7 years ago by
Guillaume Meurice
▴ 210 • written 13.7 years ago by
Dana.Stanley@csiro.au
▴ 110
0
votes
6
replies
2.3k
views
2 way anova in Bioconductor
GO
genefilter
limma
GeneSpring
ABarray
preprocessCore
arrayQualityMetrics
GO
genefilter
updated 13.7 years ago by
Jenny Drnevich
★ 2.0k • written 13.7 years ago by
Dana.Stanley@csiro.au
▴ 110
0
votes
0
replies
1.2k
views
Bioconductor Digest, Vol 100, Issue 28
GO
TimeCourse
genefilter
timecourse
ABarray
preprocessCore
GeneSelector
GO
TimeCourse
13.7 years ago
Dennis.Burian@faa.gov
▴ 90
0
votes
8
replies
2.7k
views
Import files from Applied Biosystems 7900HT?
ABarray
ABarray
updated 14.9 years ago by
Heidi Dvinge
★ 2.0k • written 14.9 years ago by
Brian Diggs
▴ 30
0
votes
0
replies
939
views
Fwd: Urgent..........Problem in using ABarray
ABarray
ABarray
15.6 years ago
Priyanka Jain
▴ 20
0
votes
0
replies
6.7k
views
Urgent..........Problem in using ABarray
ABarray
ABarray
15.6 years ago
Priyanka Jain
▴ 20
0
votes
11
replies
3.4k
views
Venn Diagram
Cancer
ABarray
Cancer
ABarray
updated 15.7 years ago by
SimonNoël
▴ 450 • written 15.7 years ago by
Hervé Pagès
16k
0
votes
1
reply
1.2k
views
Venn Diagram
ABarray
ABarray
updated 15.7 years ago by
Thomas Hampton
▴ 750 • written 15.7 years ago by
SimonNoël
▴ 450
0
votes
0
replies
1.0k
views
ABarray
ABarray
ABarray
17.4 years ago
Sabah Khalid
▴ 10
0
votes
3
replies
1.5k
views
Problem with ABarray package
ABarray
ABarray
updated 18.1 years ago by
James W. MacDonald
68k • written 18.1 years ago by
Alison Ziesel
▴ 60
12 results • Page
1 of 1
Recent ...
Replies
Comment: how many significant figures are there in DESeq2 output
by
ATpoint
★ 4.7k
If you want consistency then use a fixed software environment like Docker, wirh fixed code and thresholds that make sense. Rounding to near…
Comment: Compare TCGA-PAAD with GTEx gene expression
by
Jane
• 0
why aren't there any answers?
Comment: Too many significant genes when integrating gtex and tcga
by
Jane
• 0
I encountered the same issue: too many DEGs after limma analysis. It is sad that until today we can still see the paper published where GTE…
Comment: how many significant figures are there in DESeq2 output
by
Matthew McCormack
▴ 180
Thank you for your reply. It is good to know that cutoff of 0.05 means less than 0.05. My concerns are about consistency and reproducibili…
Comment: DiffBind edgeR normalization --- why are the normalization factors all equal to
by
ATpoint
★ 4.7k
No, normalization factors from edgeR rather than size factors from DESeq2 are not proportional, it's a different concept and implementation…
Votes
A: Unbalanced experiment with multiple samples from each patient.
Unbalanced experiment with multiple samples from each patient.
Answer: Vertical line at A=0, nothing else, on MA plot
Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct
Answer: Group-specific condition effects with individuals nested: matrix is not full ra
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