Bioconductor Abarray

Showing : Abarray • reset

votes

replies

1.1k

views

Abarray error ABI Human Genome Survey V2

7.1 years ago judemtaylor • 0

votes

1.4k

views

probe ABarray probe ABarray

13.2 years ago • updated 13.1 years ago Iain Gallagher ▴ 930

votes

3.2k

views

Microarray GO genefilter limma GeneSpring ABarray preprocessCore arrayQualityMetrics BRAIN

updated 13.8 years ago by Guillaume Meurice ▴ 210 • written 13.8 years ago by Dana.Stanley@csiro.au ▴ 110

votes

replies

2.3k

views

GO genefilter limma GeneSpring ABarray preprocessCore arrayQualityMetrics GO genefilter

updated 13.8 years ago by Jenny Drnevich ★ 2.0k • written 13.8 years ago by Dana.Stanley@csiro.au ▴ 110

votes

replies

1.2k

views

GO TimeCourse genefilter timecourse ABarray preprocessCore GeneSelector GO TimeCourse

13.8 years ago Dennis.Burian@faa.gov ▴ 90

votes

replies

2.8k

views

ABarray ABarray

updated 15.0 years ago by Heidi Dvinge ★ 2.0k • written 15.0 years ago by Brian Diggs ▴ 30

votes

replies

957

views

ABarray ABarray

15.7 years ago Priyanka Jain ▴ 20

votes

replies

7.0k

views

ABarray ABarray

15.7 years ago Priyanka Jain ▴ 20

votes

replies

3.4k

views

Cancer ABarray Cancer ABarray

updated 15.8 years ago by SimonNoël ▴ 450 • written 15.8 years ago by Hervé Pagès 16k

votes

1.3k

views

ABarray ABarray

updated 15.8 years ago by Thomas Hampton ▴ 750 • written 15.8 years ago by SimonNoël ▴ 450

votes

replies

1.1k

views

ABarray ABarray

17.5 years ago Sabah Khalid ▴ 10

votes

replies

1.5k

views

ABarray ABarray

updated 18.2 years ago by James W. MacDonald 68k • written 18.2 years ago by Alison Ziesel ▴ 60

12 results • Page 1 of 1

Recent ...

Replies

Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30

I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

Votes

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

Awards • All