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ARSyNseq
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NOISeq error message while using ARSyNseq batch correction function
noiseq
batch effect
ARSyNseq
9.4 years ago
lina.faller
▴ 10
1 result • Page
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Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene
by
Wolfgang RAFFELSBERGER
▴ 140
Yes, rtools4.4 is installed (and works for making my own packages)
Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene
by
Wolfgang RAFFELSBERGER
▴ 140
Thank you, this solved the problem !
Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene
by
ATpoint
★ 4.7k
I cannot reproduce this on Windows 11. Is rtools installed to allow compilation from source on Windows?
Comment: Conumee with EPICv2 Segment function
by
zpingfeng
• 0
I have the same issue too for the analysis lack of sample replicates. It was fine for the samples with replicates
Comment: Complex contrasts for between and within subject comparisons
by
wuwenhui2
• 0
@gordonsmyth Dear Dr. Smyth, in this design, I am interested to extract genes that have different expression profile at any of the time poi…
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Comment: Identifying potentially associated gene set to drug response using GSVA
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Comment: Can't post a question?
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
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