Bioconductor 16srRNA

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DESeq2 diferentialabundance 16srRNA baseMean

updated 2.0 years ago by Michael Love 43k • written 2.0 years ago by PhD_student_microbiome • 0

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Microbiome 16s Deseq2 16srRNA

updated 3.0 years ago by Michael Love 43k • written 3.0 years ago by Katelyn ▴ 10

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Comment: DiffBind can't find a DAR by Mengjun • 0

The details about this question: I have 4 samples with 2 conditions( ctrl_1, ctrl_2, ko_1, ko_2), i use these 4 samples as input. Here is …

Comment: DiffBind can't find a DAR by Mengjun • 0

Thank you very much for pointing out this shortcoming. I will improve it.

Comment: samtools loading in R by Charlie • 0

This is obviously a very late answer but I had a similar error: > sh: samtools: command not found > > sh: samtools: command not found > …

Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by njmcdirect • 0

https://www.www-njmcdirect.run/

Answer: DiffBind - question on the use of filtered or unfiltered input data by blackleatherjackets.blj • 0

Great discussion! Clarifying filtered vs. unfiltered input in DiffBind really helps deepen understanding. Appreciate the detailed responses…

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Answer: how to use `arrayWeightsQuick()`?

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