Bioconductor 10X

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CellRanger emptyDrops scRNAseq 10X

10 months ago rocanja ▴ 60

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1.0k

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SingleCell emptyDrops 10X

updated 21 months ago by Peter Hickey ▴ 750 • written 21 months ago by sandra.garces.19 • 0

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951

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RNAseq 10X

22 months ago wt215 • 0

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DropletUtils emptyDrops scRNA scRNAseq 10x

2.5 years ago Peter Hickey ▴ 750

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1.3k

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DropletUtils emptyDrops 10x

updated 4.0 years ago by Aaron Lun ★ 28k • written 4.0 years ago by Peter Hickey ▴ 750

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deseq2 zinbwave 10X scRNA-seq Differential expression

updated 4.6 years ago by Michael Love 43k • written 4.6 years ago by vincent.croset ▴ 20

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3.1k

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10x scrna-seq

updated 5.8 years ago by Aaron Lun ★ 28k • written 5.8 years ago by jma1991 ▴ 70

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8.1k

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single-cell 10X Cell calling DropletUtils cellranger

updated 5.9 years ago by Aaron Lun ★ 28k • written 5.9 years ago by xingxd16 ▴ 20

8 results • Page 1 of 1

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Comment: Unused arguments error without used arguments in GSVA? by 1sunmic2 • 0

It was due to the comma. Thank you!

Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Votes

Answer: Unused arguments error without used arguments in GSVA?

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

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Teacher to Axel Klenk ★ 1.1k