Bioconductor .cel fiels

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R .cel fiels microarray mouse4302

6.7 years ago aacharya • 0

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.cel fiels

updated 8.1 years ago by cstrato ★ 3.9k • written 8.1 years ago by farahqureshi5 • 0

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cel .cel fiels

8.1 years ago farahqureshi5 • 0

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microarray .CEL fiels .DTT tools

updated 8.1 years ago by James W. MacDonald 68k • written 8.1 years ago by renugene • 0

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Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k

If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…

Answer: PhD scholar by ATpoint ★ 4.8k

Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…

Answer: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k

Yes, that is the correct way to use `arrayWeightsQuick`. Thanks for pointing out that there is still a reference to `arrayWeightsSimple` i…

Answer: fast apply on RleList by story.benjamin ▴ 20

solved with viewApply (code is simplified below) + map reduce on chrs test.split <- split(test.gr,seqnames(test.gr)) final.st…

Comment: fast apply on RleList by story.benjamin ▴ 20

Hi James, thanks for the reply. I ultimately figured it out ... viewApply showed a massive speed increase for me (see other answer) - I was…

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Answer: Origin of the labels for the SingleCellMultiModal dataset

Answer: PhD scholar

Answer: how to use `arrayWeightsQuick()`?

Having Trouble Using CNE12() and CNE21() in CNEr

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