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Comment: Normalization RNA-seq for multiple plates
by
ATpoint
★ 4.4k
What are "plates"? You mean sequencing runs? Have the libraries been prepared the same time or in a balanced / batch-aware fashion? Add som…
Comment: filterbyexp() in edgeR
by
Yunshun Chen
▴ 870
Since you only have 1 sample in `DonorD_01`, your `Gene_X` will not be filtered if it exceeds the CPM cut-off in at least 1 sample. In a ty…
Comment: SAS token for Annotation package
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KABILAN
• 0
I got mail from your side. Thank you so much.
Comment: filterbyexp() in edgeR
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picasa1983
• 0
Thanks for your reply. I have edited my initial post
Answer: SAS token for Annotation package
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shepherl
4.0k
I'm sorry for the delayed response. The core team is very busy during the time leading up to the next release and it can take a few days f…
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Answer: SAS token for Annotation package
Answer: SAS token for Annotation package
A: How featureCounts define the gene length
A: How featureCounts define the gene length
Answer: DEseq 2 LFC shrinkage with apeglm in single-cell pseudobulk: strange volcano plo
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