hi all, I see an error with my package:

  https://master.bioconductor.org/checkResults/3.12/bioc-LATEST/PADOG/malbec1-checksrc.html

namely an error due to a call to an lme function "lme.formula(Y ~ Method, random = ~1 | Path/Dataset, data = dset)"

However, when I try to get a copy of the code using
git clone git@git.bioconductor.org:packages/PADOG

the function in question (compPADOG) does not contain that function call but an updated one that I submitted in the past that was supposed to fix the error: "lme(Y ~ Method, random = ~1 | Path, data = dset)"

Should I be using another repository with git? Thanks, Adi

Questions about package development should be sent to bioc-devel@r-project.org.

Do note that there's a whole webpage intended to show how to update both release and devel. You've done the latter but not the former.