"NNG[A|G][A|G]N$" in CRISPRseek code
2
0
Entering edit mode
@bhanson1806-11727
Last seen 7.3 years ago

Good day

I would like to know what the $ and | signs stand for in the "NNG[A|G][A|G]N$" portion, pertaining to the SaCas9 PAM recognition motif, of the CRISPRseek code?

 

Many thanks

Britt

crisprseek SaCas9 PAM • 1.3k views
ADD COMMENT
0
Entering edit mode
Julie Zhu ★ 4.3k
@julie-zhu-3596
Last seen 12 months ago
United States
Britt, $ indicates the end of the string and | stands for or in pattern specification. Best regards, Julie From: "bhanson1806 [bioc]" <noreply@bioconductor.org> Reply-To: "reply+85fec19f+code@bioconductor.org" <reply+85fec19f+code@bioconductor.org> Date: Wednesday, August 2, 2017 at 1:06 PM To: "Zhu, Lihua (Julie)" <julie.zhu@umassmed.edu> Subject: [bioc] "NNG[A|G][A|G]N$" in CRISPRseek code Activity on a post you are following on support.bioconductor.org<https: support.bioconductor.org=""> User bhanson1806<https: support.bioconductor.org="" u="" 11727=""/> wrote Question: "NNG[A|G][A|G]N$" in CRISPRseek code<https: support.bioconductor.org="" p="" 98769=""/>: Good day I would like to know what the $ and | signs stand for in the "NNG[A|G][A|G]N$" portion, pertaining to the SaCas9 PAM recognition motif, of the CRISPRseek code? Many thanks Britt ________________________________ Post tags: crisprseek, SaCas9, PAM You may reply via email or visit "NNG[A|G][A|G]N$" in CRISPRseek code
ADD COMMENT
0
Entering edit mode
@bhanson1806-11727
Last seen 7.3 years ago

Dear Julie

Thank you so much for your response! 

Kind regards
Britt

ADD COMMENT

Login before adding your answer.

Traffic: 539 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6