Build hgu133a2

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chris umbricht ▴ 110

@chris-umbricht-1329

Last seen 10.2 years ago

Does anyone have the script(s) necessary to build the latest Affi chip data annotation pckg (133a2) from the source? thanks.

Annotation Annotation • 848 views

ADD COMMENT • link updated 19.4 years ago by Ting-Yuan Liu FHCRC ▴ 780 • written 19.4 years ago by chris umbricht ▴ 110

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Ting-Yuan Liu FHCRC ▴ 780

@ting-yuan-liu-fhcrc-1221

Last seen 10.2 years ago

Hi Chris, AnnBuilder is the package you need to build the latest hgu133a2. You also have to create basefiles from the latest Affymetrix annotation file. See the two AnnBuilder vignettes for more details. HTH, Ting-Yuan Quoting chris umbricht <cumbrich at="" jhmi.edu="">: > Does anyone have the script(s) necessary to build the latest Affi chip > data annotation pckg (133a2) from the source? > > thanks. > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor >

ADD COMMENT • link 19.4 years ago Ting-Yuan Liu FHCRC ▴ 780

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ADD REPLY • link 19.4 years ago chris umbricht ▴ 110

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Found them! c. On Jul 15, 2005, at 11:51 AM, chris umbricht wrote: > Ting-Yuan, > > thanks for your reply. > If by vignettes you mean the 2 pdf files ABPrimer.pdf and > AnnBuilder.pdf, they do not open when I click on them from within the R > package manager. > Are they available directly on the Bioconductor site?

ADD REPLY • link 19.4 years ago chris umbricht ▴ 110

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